RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ACTBP60709 375 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 ACTG1P63261 375 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 SMAD4Q13485 552 aaKnown RBP15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 TOMM20Q15388 145 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 TOMM34Q15785 309 aaPredicted RBP15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 SLC18B1Q6NT16 456 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 PRR22Q8IZ63 422 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 DEFB119Q8N690 84 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 PLPP7Q8NBV4 271 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 ASB13Q8WXK3 278 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 PPP1R14AQ96A00 147 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 FOXN4Q96NZ1 517 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 LANCL2Q9NS86 450 aa15.19■□□□□ 0.02
PRKCSH-205ENST00000587327 A8MUA0 341 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 A8MXK9 166 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 ITGB2P05107 769 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 LPLP06858 475 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 PROS1P07225 676 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 CENPAP49450 140 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 ROM1Q03395 351 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 GK2Q14410 553 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 TMEM225Q6GV28 225 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 C11orf88Q6PI97 169 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 TMEM151BQ8IW70 566 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 GABRG1Q8N1C3 465 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 SLC25A28Q96A46 364 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 ADIPOR1Q96A54 375 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 PHF7Q9BWX1 381 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 C1orf198Q9H425 327 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 MRPL22Q9NWU5 206 aaKnown RBP15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 PFDN2Q9UHV9 154 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 GTF2A1LQ9UNN4 478 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 KRBOX1C9JBD0 128 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 PLGP00747 810 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 RPL27P61353 136 aaKnown RBP15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 ACKR1Q16570 336 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 MAMDC2Q7Z304 686 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 ASB5Q8WWX0 329 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 SEH1LQ96EE3 360 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 SHARPINQ9H0F6 387 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 POFUT1Q9H488 388 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 LMAN1LQ9HAT1 526 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 DHDHQ9UQ10 334 aa15.18■□□□□ 0.02
PRKCSH-205ENST00000587327 C17orf51A8MQB3 221 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 SULT1C2O00338 296 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 CDK2AP1O14519 115 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 SLC16A7O60669 478 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 OR6A2O95222 327 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 IGKV3-11P04433 115 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 SPARCP09486 303 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 PTGS2P35354 604 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 TAS2R19P59542 299 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 INSM1Q01101 510 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 SGCBQ16585 318 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 GLT8D1Q68CQ7 371 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 NDUFAF7Q7L592 441 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 OVCH2Q7RTZ1 564 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 OR6M1Q8NGM8 313 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 ZNF519Q8TB69 540 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 C8orf44Q96CB5 159 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 SLC25A36Q96CQ1 311 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 NKX3-1Q99801 234 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 PTDSS2Q9BVG9 487 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 UPB1Q9UBR1 384 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 CKLFQ9UBR5 152 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 CA14Q9ULX7 337 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 IGLV1-36A0A0B4J1U3 117 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 A0A1W2PR77 199 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 FITM1A5D6W6 292 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 H3BUI4 141 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 ZNF217O75362 1048 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 WISP1O95388 367 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 PMS2P2O95744 297 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 MT-ATP6P00846 226 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 NME1P15531 152 aaKnown RBP15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 RPA2P15927 270 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 MAOBP27338 520 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 FASLGP48023 281 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 MFGE8Q08431 387 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 TDGQ13569 410 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 UBXN2BQ14CS0 331 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 ZNF660Q6AZW8 331 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 TMEM81Q6P7N7 255 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 KCTD18Q6PI47 426 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 MARCH3Q86UD3 253 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 OR6K3Q8NGY3 331 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 DUSP19Q8WTR2 217 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 CCDC107Q8WV48 283 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 GAL3ST4Q96RP7 486 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 POTEKPQ9BYX7 375 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 MFFQ9GZY8 342 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 SOHLH2Q9NX45 425 aa15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 VSX1Q9NZR4 365 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-205ENST00000587327 IGHV5-51A0A0C4DH38 117 aa15.16■□□□□ 0.02
PRKCSH-205ENST00000587327 A0A1W2PPC1 479 aa15.16■□□□□ 0.02
PRKCSH-205ENST00000587327 SLC25A12O75746 678 aa15.16■□□□□ 0.02
PRKCSH-205ENST00000587327 AQP8O94778 261 aa15.16■□□□□ 0.02
PRKCSH-205ENST00000587327 NUDT14O95848 222 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms