RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 UBE2NLQ5JXB2 153 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 PRAMEF20Q5VT98 475 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 TIGD3Q6B0B8 471 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 H3F3CQ6NXT2 135 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 JMJD6Q6NYC1 403 aaPredicted RBP10.08□□□□□ -0.8
LIG3-204ENST00000585740 LRRN1Q6UXK5 716 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 GLB1L2Q8IW92 636 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 KDF1Q8NAX2 398 aaPredicted RBP10.08□□□□□ -0.8
LIG3-204ENST00000585740 SLC26A10Q8NG04 563 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 OR4M1Q8NGD0 313 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 OR6X1Q8NH79 312 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 ZNF671Q8TAW3 534 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 ENKURQ8TC29 256 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 RGP1Q92546 391 aaPredicted RBP10.08□□□□□ -0.8
LIG3-204ENST00000585740 MIB2Q96AX9 1013 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 ZC3HAV1LQ96H79 300 aaKnown RBP10.08□□□□□ -0.8
LIG3-204ENST00000585740 GPR87Q9BY21 358 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 SPRY4Q9C004 299 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 B3GNT4Q9C0J1 378 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 CCDC86Q9H6F5 360 aaKnown RBP10.08□□□□□ -0.8
LIG3-204ENST00000585740 BRD7Q9NPI1 651 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 TMEM9BQ9NQ34 198 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 AK6Q9Y3D8 172 aaKnown RBP10.08□□□□□ -0.8
LIG3-204ENST00000585740 HRH3Q9Y5N1 445 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 V9GY05 133 aa10.08□□□□□ -0.8
LIG3-204ENST00000585740 KIAA1549Q9HCM3 1950 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 TRABD2BA6NFA1 517 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 ACOD1A6NK06 481 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 TTLL8A6PVC2 850 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 SHISA8B8ZZ34 492 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 SULT2B1O00204 365 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 CDX4O14627 284 aaPredicted RBP10.07□□□□□ -0.8
LIG3-204ENST00000585740 PIN1P1O15428 100 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 DNPH1O43598 174 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 TPPPO94811 219 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 UBL3O95164 117 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 VAMP5O95183 116 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 EIF4EP06730 217 aaKnown RBP10.07□□□□□ -0.8
LIG3-204ENST00000585740 CCL3P10147 92 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 MAP2K3P46734 347 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 RFX2P48378 723 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 P2RY4P51582 365 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 CLRN1P58418 232 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 CSNK2A1P68400 391 aaPredicted RBP10.07□□□□□ -0.8
LIG3-204ENST00000585740 TMEM176BQ3YBM2 270 aaPredicted RBP10.07□□□□□ -0.8
LIG3-204ENST00000585740 STPG1Q5TH74 334 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 TMEM225Q6GV28 225 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 NHLRC1Q6VVB1 395 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 TMPPEQ6ZT21 453 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 TIPARPQ7Z3E1 657 aaKnown RBP10.07□□□□□ -0.8
LIG3-204ENST00000585740 NRARPQ7Z6K4 114 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 KDM8Q8N371 416 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 NOXO1Q8NFA2 376 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 C15orf40Q8WUR7 153 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 RFT1Q96AA3 541 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 SLC25A44Q96H78 314 aaPredicted RBP10.07□□□□□ -0.8
LIG3-204ENST00000585740 PIGQQ9BRB3 760 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 WACQ9BTA9 647 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 ABHD6Q9BV23 337 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 B3GAT1Q9P2W7 334 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 MALT1Q9UDY8 824 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 CAMK2AQ9UQM7 478 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 ETV7Q9Y603 341 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 R4GMQ9 66 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 ALPK2Q86TB3 2170 aa10.07□□□□□ -0.8
LIG3-204ENST00000585740 LAMA1P25391 3075 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 A0A1W2PPK0 400 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 IFITM5A6NNB3 132 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 ZNF726A6NNF4 738 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 CDK2AP1O14519 115 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 CTDSPLO15194 276 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 TRAF3IP2O43734 574 aaPredicted RBP10.06□□□□□ -0.8
LIG3-204ENST00000585740 GPANK1O95872 356 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 TRAPPC2P0DI81 140 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 TRAPPC2BP0DI82 140 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 ZNF43P17038 809 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 LAP3P28838 519 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 SRD5A2P31213 254 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 DCTDP32321 178 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 KIR3DL2P43630 455 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 RAC1P63000 192 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 P2RY14Q15391 338 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 INPP5JQ15735 1006 aaPredicted RBP10.06□□□□□ -0.8
LIG3-204ENST00000585740 ETFDHQ16134 617 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 CCDC157Q569K6 752 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 WDR38Q5JTN6 314 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 AGAP6Q5VW22 663 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 STAC2Q6ZMT1 411 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 ZNF704Q6ZNC4 412 aaPredicted RBP10.06□□□□□ -0.8
LIG3-204ENST00000585740 LRRC69Q6ZNQ3 347 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 CATSPERDQ86XM0 798 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 RDH10Q8IZV5 341 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 PRSS35Q8N3Z0 413 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 IL17RDQ8NFM7 739 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 TSEN15Q8WW01 171 aaKnown RBP10.06□□□□□ -0.8
LIG3-204ENST00000585740 KCNE4Q8WWG9 221 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 RAB40AQ8WXH6 277 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 HSD17B8Q92506 261 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 AGAP4Q96P64 663 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 IP6K3Q96PC2 410 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms