RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 FAM27BQ5VT28 67 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 MBNL2Q5VZF2 373 aaKnown RBP12.77□□□□□ -0.37
VAPA-209ENST00000585042 USP51Q70EK9 711 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 PEG10Q86TG7 708 aaKnown RBP12.77□□□□□ -0.37
VAPA-209ENST00000585042 TREML1Q86YW5 311 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 ALDH16A1Q8IZ83 802 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 LRRC18Q8N456 261 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 SYT14Q8NB59 555 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 NANPQ8TBE9 248 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 SGTBQ96EQ0 304 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 POM121L2Q96KW2 1035 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 DIRC2Q96SL1 478 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 SUCNR1Q9BXA5 334 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 TXNIPQ9H3M7 391 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 SAP30LQ9HAJ7 183 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 GID8Q9NWU2 228 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 RIMS3Q9UJD0 308 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 ZDHHC8Q9ULC8 765 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 WIPI2Q9Y4P8 454 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 PPIAL4EA0A075B759 164 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 PPIAL4CA0A0B4J2A2 164 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 PLSCR5A0PG75 271 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 PPIAL4DF5H284 164 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 PPIAL4FP0DN26 164 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 TUBG1P23258 451 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 AQP2P41181 271 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 GUCA1AP43080 201 aaPredicted RBP12.76□□□□□ -0.37
VAPA-209ENST00000585042 MMP15P51511 669 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 CRYBA2P53672 197 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 ACTG1P63261 375 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 THEM4Q5T1C6 240 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 NANOGP8Q6NSW7 305 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 C10orf82Q8WW14 230 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 TMEM239Q8WW34 195 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 GCDHQ92947 438 aaPredicted RBP12.76□□□□□ -0.37
VAPA-209ENST00000585042 NMD3Q96D46 503 aaKnown RBP12.76□□□□□ -0.37
VAPA-209ENST00000585042 MARS2Q96GW9 593 aaKnown RBP12.76□□□□□ -0.37
VAPA-209ENST00000585042 ELAC2Q9BQ52 826 aaKnown RBP12.76□□□□□ -0.37
VAPA-209ENST00000585042 WACQ9BTA9 647 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 TMPRSS13Q9BYE2 586 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 PLA2G12AQ9BZM1 189 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 EGLN1Q9GZT9 426 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 FAM107BQ9H098 131 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 OR51B6Q9H340 312 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 TUBG2Q9NRH3 451 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 KLHL21Q9UJP4 597 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 SH3GLB1Q9Y371 365 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 UGT2A1Q9Y4X1 527 aa12.76□□□□□ -0.37
VAPA-209ENST00000585042 MRASO14807 208 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 DYSFO75923 2080 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 AVPP01185 164 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 GDI2P50395 445 aaKnown RBP12.75□□□□□ -0.37
VAPA-209ENST00000585042 TAS2R41P59536 307 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 PCBD1P61457 104 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 GNGT1P63211 74 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 ZMAT1Q5H9K5 638 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 AVPI1Q5T686 147 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 DCAF12L2Q5VW00 463 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 ERICH5Q6P6B1 374 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 SLC25A47Q6Q0C1 308 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 ARL9Q6T311 187 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 CALHM3Q86XJ0 350 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 NKAIN4Q8IVV8 208 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 C3orf56Q8N813 242 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 ICA1LQ8NDH6 482 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 OR8J3Q8NGG0 315 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 TMEM255BQ8WV15 326 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 NABP1Q96AH0 204 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 RBP7Q96R05 134 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 ECSITQ9BQ95 431 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 ALG12Q9BV10 488 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 ELOVL3Q9HB03 270 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 MED31Q9Y3C7 131 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 TIMM10BQ9Y5J6 103 aa12.75□□□□□ -0.37
VAPA-209ENST00000585042 LOC100509620A0A075B734 347 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 LOC105371242A0A075B767 164 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 LOC100653049A0A140TA62 436 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 C5orf49A4QMS7 147 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 SPRY1O43609 319 aaPredicted RBP12.74□□□□□ -0.37
VAPA-209ENST00000585042 KRT34O76011 436 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 UBOX5O94941 541 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 IGHV1-46P01743 117 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 CD55P08174 381 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 CST2P09228 141 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 ZNF32P17041 273 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 CCNOP22674 350 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 FPR2P25090 351 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 CDAP32320 146 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 WNT5AP41221 380 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 PSG4Q00888 419 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 LAPTM4AQ15012 233 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 SGCAQ16586 387 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 TSTQ16762 297 aaKnown RBP12.74□□□□□ -0.37
VAPA-209ENST00000585042 ANKDD1AQ495B1 522 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 FAM205BPQ63HN1 556 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 ZER1Q7Z7L7 766 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
VAPA-209ENST00000585042 PFN4Q8NHR9 129 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms