RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 AIM2O14862 343 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SIGLEC5O15389 551 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PDE5AO76074 875 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CTSLP07711 333 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 C1GALT1C1LP0DN25 315 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PTPN4P29074 926 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 HPCAL1P37235 193 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PAX9P55771 341 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 DLG1Q12959 904 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 GAGE5Q13069 117 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 GAGE6Q13070 117 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SIX1Q15475 284 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNHIT3Q15649 155 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CCSMST1Q4G0I0 132 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF658BQ4V348 819 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SPANXN2Q5MJ10 180 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FFAR4Q5NUL3 377 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NIPAL3Q6P499 406 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 IGFL2Q6UWQ7 119 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM159AQ6UWV7 190 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 C19orf35Q6ZS72 473 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NDUFAF7Q7L592 441 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RANBP3LQ86VV4 465 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CHERPQ8IWX8 916 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NRMQ8IXM6 262 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RFLNBQ8N5W9 214 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NPWQ8N729 165 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 OR4E2Q8NGC2 313 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 OR4K2Q8NGD2 314 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 OR9Q2Q8NGE9 314 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 BLOC1S5Q8TDH9 187 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC5A11Q8WWX8 675 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM107BQ9H098 131 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 EGLN3Q9H6Z9 239 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CCNB1IP1Q9NPC3 277 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PNO1Q9NRX1 252 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 DCAF13Q9NV06 445 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 DDX18Q9NVP1 670 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 OPTCQ9UBM4 332 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PPP1R3CQ9UQK1 317 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PIGLQ9Y2B2 252 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 IFT52Q9Y366 437 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 WIPI2Q9Y4P8 454 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 KLF2Q9Y5W3 355 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NPTNQ9Y639 398 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 THADAQ6YHU6 1953 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 LOC105371242A0A075B767 164 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A087WZ39 114 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A0U1RQV5 110 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 VSTM2BA6NLU5 285 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 H3BNH8 94 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CCL24O00175 119 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FAAHO00519 579 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 STK16O75716 305 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ATP5HO75947 161 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 DFFBO76075 338 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SORBS2O94875 1100 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CLDN9O95484 217 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 C1orf105O95561 183 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 STAMBPO95630 424 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 KRT75O95678 551 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 GOT2P00505 430 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 TCN2P20062 427 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RRM2P31350 389 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 IGLV3-21P80748 117 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PNRC1Q12796 327 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RBBP5Q15291 538 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 XKR6Q5GH73 641 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SAMD4BQ5PRF9 694 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RAET1LQ5VY80 246 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 DMKNQ6E0U4 476 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 OR2A2Q6IF42 318 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ERICH5Q6P6B1 374 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 Q75L30 129 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 HSD11B1LQ7Z5J1 315 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ABHD12BQ7Z5M8 362 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CPEB2Q7Z5Q1 589 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CCDC54Q8NEL0 328 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 BPIFCQ8NFQ6 507 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 OR2Y1Q8NGV0 311 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RFESDQ8TAC1 157 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 MIPOL1Q8TD10 442 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NEUROG1Q92886 237 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PNPLA2Q96AD5 504 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 UPRTQ96BW1 309 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 C12orf66Q96MD2 445 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RAB40CQ96S21 281 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SELENOSQ9BQE4 189 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CABLES2Q9BTV7 478 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CSTL1Q9H114 145 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SLITRK2Q9H156 845 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CXXC4Q9H2H0 198 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 WDR55Q9H6Y2 383 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RNF122Q9H9V4 155 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 GPATCH2LQ9NWQ4 482 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF282Q9UDV7 671 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 KCNG2Q9UJ96 466 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FBXL4Q9UKA2 621 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PITPNC1Q9UKF7 332 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FOXJ3Q9UPW0 622 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms