RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 CHST11Q9NPF2 352 aa10.54□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF224Q9NZL3 707 aa10.54□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ING4Q9UNL4 249 aa10.54□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RHBDD3Q9Y3P4 386 aa10.54□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SPTY2D1-AS1A0A0U1RR47 76 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FGF17O60258 216 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 IGHA1P01876 353 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SUCLG1P53597 346 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CBFBQ13951 182 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FZD2Q14332 565 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OR1Q1Q15612 314 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OR52L1Q8NGH7 329 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SMPDL3BQ92485 455 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DPF1Q92782 380 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 C14orf144Q96I85 54 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HYLS1Q96M11 299 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PRSS27Q9BQR3 290 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 VCX2Q9H322 139 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SLC2A4RGQ9NR83 387 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 KCMF1Q9P0J7 381 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ADAM30Q9UKF2 790 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MRPS17Q9Y2R5 130 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ADAM18Q9Y3Q7 739 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 NUBP2Q9Y5Y2 271 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HEBP2Q9Y5Z4 205 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MPDZO75970 2070 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 IGHV1OR15-9A0A0B4J2B8 117 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 A0A1W2PPC4 97 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SGK494L7N484 410 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RGS11O94810 467 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MPC2O95563 127 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RPS27P42677 84 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 UBE2MP61081 183 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SHC2P98077 582 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HHEXQ03014 270 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZBTB37Q5TC79 503 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FCRL6Q6DN72 434 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TEX261Q6UWH6 196 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 LINGO2Q7L985 606 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OAFQ86UD1 273 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 LRRC28Q86X40 367 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 LRRC25Q8N386 305 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 STXBP6Q8NFX7 210 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OR4N2Q8NGD1 307 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OR2T35Q8NGX2 323 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FLVCR1-AS1Q8TAF5 88 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SFXN5Q8TD22 340 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 LMX1AQ8TE12 382 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TMEM239Q8WW34 195 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 KISS1RQ969F8 398 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CREB3L1Q96BA8 519 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RAB11FIP5Q9BXF6 653 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 GSX1Q9H4S2 264 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 METTL17Q9H7H0 456 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TRIM36Q9NQ86 728 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MRPS18BQ9Y676 258 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 U3KQ87 197 aa10.53□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SLC19A2O60779 497 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 SLC22A5O76082 557 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 RPP14O95059 124 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 DTYMKP23919 212 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 MAZP56270 477 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 YPEL5P62699 121 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 ZNF85Q03923 595 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 DECR1Q16698 335 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 LGALSLQ3ZCW2 172 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 Q6ZTK2 550 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 CREB3L2Q70SY1 520 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 OR52E2Q8NGJ4 325 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 RIT1Q92963 219 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 BPIFA2Q96DR5 249 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 KTI12Q96EK9 354 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 ZC3HAV1LQ96H79 300 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 SDF2Q99470 211 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 NDC1Q9BTX1 674 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 GAL3ST2Q9H3Q3 398 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 NANSQ9NR45 359 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 KLK11Q9UBX7 282 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 GNG8Q9UK08 70 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 EXOGQ9Y2C4 368 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 A0A0G2JK05 382 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 BRI3O95415 125 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 UGT2B7P16662 529 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 RAB3BP20337 219 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 HSD11B1P28845 292 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 EPHA8P29322 1005 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 EXOSC2Q13868 293 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 DEFB133Q30KQ1 61 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 ALKBH6Q3KRA9 238 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 PRSS57Q6UWY2 283 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 MRGPREQ86SM8 312 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 FAM98AQ8NCA5 519 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 OR6K6Q8NGW6 343 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 OR51Q1Q8NH59 317 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 OIT3Q8WWZ8 545 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 NUDT11Q96G61 164 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 OR2A5Q96R48 311 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 TOLLIPQ9H0E2 274 aa10.52□□□□□ -0.73
CDK5RAP3-231ENST00000584063 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms