RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 MSMPQ1L6U9 139 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 FGD3Q5JSP0 725 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 UNQ6126/PRO20091Q6UXV3 157 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 DPY19L2P2Q6ZN68 376 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 Q71RC1 249 aaPredicted RBP8.51□□□□□ -1.05
SKA2-208ENST00000583927 ADCK1Q86TW2 530 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 ALDH16A1Q8IZ83 802 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 ZNF786Q8N393 782 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 SVOPLQ8N434 492 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 LRRC18Q8N456 261 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 LINC00471Q8N535 108 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 CCDC197Q8NCU1 140 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 MCUR1Q96AQ8 359 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 FAM46AQ96IP4 442 aaKnown RBP8.51□□□□□ -1.05
SKA2-208ENST00000583927 NSL1Q96IY1 281 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 ZNF570Q96NI8 536 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 SNX18Q96RF0 628 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 VRK1Q99986 396 aaPredicted RBP8.51□□□□□ -1.05
SKA2-208ENST00000583927 PIMREGQ9BSJ6 248 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 RNF121Q9H920 327 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 VSX1Q9NZR4 365 aaPredicted RBP8.51□□□□□ -1.05
SKA2-208ENST00000583927 AURKCQ9UQB9 309 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 ADAM18Q9Y3Q7 739 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 WNK2Q9Y3S1 2297 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 TEX13CA0A0J9YWL9 993 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 B2RBV5 119 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 M0R233 179 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 ARPC3O15145 178 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 FABP3P05413 133 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 T-ENOLP0DO92 83 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 ZNF32P17041 273 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 MSR1P21757 451 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 USF1P22415 310 aaPredicted RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 TUBG1P23258 451 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 FPR3P25089 353 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 STOMP27105 288 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 CDAP32320 146 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 APLNRP35414 380 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 RPL4P36578 427 aaKnown RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 IFNGR2P38484 337 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 NR4A2P43354 598 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 SELENOVP59797 346 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 LSM6P62312 80 aaKnown RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 ERVK-25P63136 954 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 MRPS11P82912 194 aaKnown RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 MXRA7P84157 204 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 PPP2R2BQ00005 443 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 PSG4Q00888 419 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 HSF2Q03933 536 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 TRIM25Q14258 630 aaKnown RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 MOGQ16653 247 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 TMEM249Q2WGJ8 235 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 MESTQ5EB52 335 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 PABPC1L2AQ5JQF8 200 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 LCN8Q6JVE9 175 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 RGS7BPQ6MZT1 257 aaPredicted RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 C1orf94Q6P1W5 598 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 SMARCD3Q6STE5 483 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 THSD4Q6ZMP0 1018 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 ZER1Q7Z7L7 766 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 IGFN1Q86VF2 1251 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 MEX3DQ86XN8 651 aaKnown RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 PAQR4Q8N4S7 273 aaPredicted RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 MAPK1IP1LQ8NDC0 245 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 CPEB3Q8NE35 698 aaKnown RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 HTRA1Q92743 480 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 RSRC1Q96IZ7 334 aaKnown RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 POM121L2Q96KW2 1035 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 Q96M85 177 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 TRIM15Q9C019 465 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 MAGIXQ9H6Y5 334 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 CDH20Q9HBT6 801 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 CCNB1IP1Q9NPC3 277 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 POLE4Q9NR33 117 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 TUBG2Q9NRH3 451 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 TMEM160Q9NX00 188 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 GPR160Q9UJ42 338 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 ADAM21Q9UKJ8 722 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 PRPF19Q9UMS4 504 aaKnown RBP8.5□□□□□ -1.05
SKA2-208ENST00000583927 TIMM10BQ9Y5J6 103 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 DYSFO75923 2080 aa8.5□□□□□ -1.05
SKA2-208ENST00000583927 COL6A5A8TX70 2615 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 UNC119BA6NIH7 251 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 C12orf71A8MTZ7 269 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 INAFM1C9JVW0 142 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 IDH3BO43837 385 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 LY6HO94772 140 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 DIRAS1O95057 198 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 STAMBPO95630 424 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 IGHV3-13P01766 116 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 ADRA2AP08913 450 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 TACSTD2P09758 323 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 HOXB6P17509 224 aaKnown RBP8.49□□□□□ -1.05
SKA2-208ENST00000583927 APEX1P27695 318 aaKnown RBP8.49□□□□□ -1.05
SKA2-208ENST00000583927 LAP3P28838 519 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 MSX2P35548 267 aaPredicted RBP8.49□□□□□ -1.05
SKA2-208ENST00000583927 GSSP48637 474 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 RPS6KA3P51812 740 aa8.49□□□□□ -1.05
SKA2-208ENST00000583927 KLF3P57682 345 aaPredicted RBP8.49□□□□□ -1.05
SKA2-208ENST00000583927 SPIBQ01892 262 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms