RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 FITM2Q8N6M3 262 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 PNLDC1Q8NA58 520 aaKnown RBP9.27□□□□□ -0.93
CASC3-208ENST00000583649 FGFBP3Q8TAT2 258 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 TMEM54Q969K7 222 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 TESCQ96BS2 214 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 SLC41A3Q96GZ6 507 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 SLC25A44Q96H78 314 aaPredicted RBP9.27□□□□□ -0.93
CASC3-208ENST00000583649 ZIM3Q96PE6 472 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 ASIC5Q9NY37 505 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 KLHL14Q9P2G3 628 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 FBLN5Q9UBX5 448 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 IGHV1-69DA0A0B4J2H0 117 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 A0A0G2JPF8 293 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 HNRNPCL2B2RXH8 293 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 TMEM233B4DJY2 109 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 ZNF879B4DU55 563 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 HNRNPCL3B7ZW38 293 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 RNASEK-C17orf49H0YIS7 233 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 H0YL77 283 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 ZNF500O60304 480 aaPredicted RBP9.26□□□□□ -0.93
CASC3-208ENST00000583649 HNRNPCL1O60812 293 aaKnown RBP9.26□□□□□ -0.93
CASC3-208ENST00000583649 FSTL3O95633 263 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 HPRP00739 348 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 IGHV1-69P01742 117 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 IGHG1P01857 330 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 QDPRP09417 244 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 FBP1P09467 338 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 HNRNPCL4P0DMR1 293 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 ADORA3P0DMS8 318 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 PRG2P13727 222 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 GUCA1AP43080 201 aaPredicted RBP9.26□□□□□ -0.93
CASC3-208ENST00000583649 CASP8Q14790 479 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 PABPC1L2AQ5JQF8 200 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 CEP85LQ5SZL2 805 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 FAM91A1Q658Y4 838 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 ZNF774Q6NX45 483 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 ZNF621Q6ZSS3 439 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 TRMT10CQ7L0Y3 403 aaKnown RBP9.26□□□□□ -0.93
CASC3-208ENST00000583649 CLIP4Q8N3C7 705 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 LSMEM1Q8N8F7 131 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 NPEPL1Q8NDH3 523 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 NPRL2Q8WTW4 380 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 PHF21AQ96BD5 680 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 COG8Q96MW5 612 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 NUF2Q9BZD4 464 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 DCAF16Q9NXF7 216 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 BTNL2Q9UIR0 455 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 VPREB3Q9UKI3 123 aa9.26□□□□□ -0.93
CASC3-208ENST00000583649 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.26□□□□□ -0.93
CASC3-208ENST00000583649 NUP214P35658 2090 aaPredicted RBP9.26□□□□□ -0.93
CASC3-208ENST00000583649 CENPVL3A0A0U1RRI6 287 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 GMNCA6NCL1 334 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 E9PQ18 207 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 PLPP3O14495 311 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 HIST1H2ABP04908 130 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 BCHEP06276 602 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 CHRNGP07510 517 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 NR2C1P13056 603 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 CASQ1P31415 396 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 CFHR2P36980 270 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 SRP9P49458 86 aaKnown RBP9.25□□□□□ -0.93
CASC3-208ENST00000583649 SLC35D2Q76EJ3 337 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 HIST3H2AQ7L7L0 130 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 ZNF101Q8IZC7 436 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 ATG16L2Q8NAA4 619 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 OR5J2Q8NH18 312 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 OR5R1Q8NH85 324 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 OR2T6Q8NHC8 308 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 HIST1H2ACQ93077 130 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 CCDC115Q96NT0 180 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 TECTBQ96PL2 329 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 OR2V2Q96R30 315 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 SIGLEC11Q96RL6 698 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 SIAEQ9HAT2 523 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 TMEM27Q9HBJ8 222 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 STX18Q9P2W9 335 aaKnown RBP9.25□□□□□ -0.93
CASC3-208ENST00000583649 ERVK-18Q9QC07 812 aa9.25□□□□□ -0.93
CASC3-208ENST00000583649 E9PBE3 544 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 C11orf98E9PRG8 122 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 C3orf84H3BNL1 204 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 RNF13O43567 381 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 PAHP00439 452 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 GCAP28676 217 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 MMP16P51512 607 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 PCBD1P61457 104 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 ZNF404Q494X3 552 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 FOXB2Q5VYV0 432 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 WDR25Q64LD2 544 aaPredicted RBP9.24□□□□□ -0.93
CASC3-208ENST00000583649 LRFN4Q6PJG9 635 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 WDR88Q6ZMY6 472 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 DCDC5Q6ZRR9 648 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 OR4C13Q8NGP0 309 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 ITLN1Q8WWA0 313 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 LHX4Q969G2 390 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 DACT3Q96B18 629 aaPredicted RBP9.24□□□□□ -0.93
CASC3-208ENST00000583649 POM121L2Q96KW2 1035 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 C4orf45Q96LM5 186 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 WDFY2Q96P53 400 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 TMEM246Q9BRR3 403 aa9.24□□□□□ -0.93
CASC3-208ENST00000583649 GCM1Q9NP62 436 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms