RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 CLEC9AQ6UXN8 241 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 BCDIN3DQ7Z5W3 292 aaKnown RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 ADGRG3Q86Y34 549 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 PLCZ1Q86YW0 608 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 LRRC17Q8N6Y2 441 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 SLC37A3Q8NCC5 494 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 WFDC11Q8NEX6 87 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 PROKR2Q8NFJ6 384 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 OR52E2Q8NGJ4 325 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 OR52I1Q8NGK6 324 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 OR1J4Q8NGS1 313 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 OR5J2Q8NH18 312 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 PAQR8Q8TEZ7 354 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 SLC25A43Q8WUT9 341 aaPredicted RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 TAAR8Q969N4 342 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 LGALS12Q96DT0 336 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 KTI12Q96EK9 354 aaPredicted RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 MRPL48Q96GC5 212 aaKnown RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 SIGLEC11Q96RL6 698 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 GPX7Q96SL4 187 aaPredicted RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 TTTY12Q9BZ98 90 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 FGF20Q9NP95 211 aaPredicted RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 NRIP3Q9NQ35 241 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 MRPS18AQ9NVS2 196 aaKnown RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 DKKL1Q9UK85 242 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 VDAC3Q9Y277 283 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 FAM215AQ9Y5M1 114 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 CHCHD2Q9Y6H1 151 aaPredicted RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 AKAP6Q13023 2319 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 FAM183AA6NL82 134 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 A6NNC1 897 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 LRRN3E7EW58 273 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 RNF13O43567 381 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 CBR3O75828 277 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 SERPINI2O75830 405 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 SLC2A10O95528 541 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 RENP00797 406 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 LCKP06239 509 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 CD14P08571 375 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 ASAH2BP0C7U1 165 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 ADORA3P0DMS8 318 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 CD36P16671 472 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 CNR1P21554 472 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 AQP2P41181 271 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 MAGEA5P43359 124 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 CAPZA2P47755 286 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 CLK1P49759 484 aaKnown RBP9.08□□□□□ -0.96
SS18-221ENST00000582448 DSCR4P56555 118 aaPredicted RBP9.08□□□□□ -0.96
SS18-221ENST00000582448 CTXN1P60606 82 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 ERVK-25P63136 954 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 ACTC1P68032 377 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 ACTA1P68133 377 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 EGR4Q05215 589 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 FOXF1Q12946 379 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 CRMP1Q14194 572 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 IRF3Q14653 427 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 SLC10A1Q14973 349 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 PON3Q15166 354 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 SPHARQ15513 63 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 SGCBQ16585 318 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 SLC25A35Q3KQZ1 300 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 SLC25A53Q5H9E4 307 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 ARMCX4Q5H9R4 360 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 C1orf185Q5T7R7 199 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 VASNQ6EMK4 673 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 RTL6Q6ICC9 239 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 C3orf33Q6P1S2 294 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 NIPAL3Q6P499 406 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 TMPRSS11AQ6ZMR5 421 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 TRILQ7L0X0 811 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 BIVMQ86UB2 503 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 IGFN1Q86VF2 1251 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 ANKRD13BQ86YJ7 626 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 ERI1Q8IV48 349 aaKnown RBP9.08□□□□□ -0.96
SS18-221ENST00000582448 KLHL36Q8N4N3 616 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 TMEM251Q8N6I4 163 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 OR2M3Q8NG83 312 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 OR4K13Q8NH42 304 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 MFSD8Q8NHS3 518 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 C12orf43Q96C57 262 aaKnown RBP9.08□□□□□ -0.96
SS18-221ENST00000582448 MBD6Q96DN6 1003 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 C1GALT1C1Q96EU7 318 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 JSRP1Q96MG2 331 aaPredicted RBP9.08□□□□□ -0.96
SS18-221ENST00000582448 COG8Q96MW5 612 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 MGLLQ99685 303 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 KATNB1Q9BVA0 655 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 FUNDC2Q9BWH2 189 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 POTEKPQ9BYX7 375 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 OR51V1Q9H2C8 321 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 CXorf56Q9H5V9 222 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 HINT3Q9NQE9 182 aaKnown RBP9.08□□□□□ -0.96
SS18-221ENST00000582448 INPP5EQ9NRR6 644 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 INIPQ9NRY2 104 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 ENPP5Q9UJA9 477 aa9.08□□□□□ -0.96
SS18-221ENST00000582448 A0A1W2PRG6 482 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 TMEM129A0AVI4 362 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 GJE1A6NN92 205 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 C17orf51A8MQB3 221 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 H3BMQ9 156 aa9.07□□□□□ -0.96
SS18-221ENST00000582448 SLC22A1O15245 554 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms