RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 CCNB1IP1Q9NPC3 277 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 NOX4Q9NPH5 578 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 TAS2R5Q9NYW4 299 aa10.68□□□□□ -0.7
SS18-219ENST00000581570 WNK1Q9H4A3 2382 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 LOC100509620A0A075B734 347 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 IGHV2-70DA0A0C4DH43 119 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 CEACAM18A8MTB9 384 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 H3BSA7 217 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 SDHDO14521 159 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 TYROBPO43914 113 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 TIMM8AO60220 97 aaPredicted RBP10.67□□□□□ -0.7
SS18-219ENST00000581570 ERLIN1O75477 346 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 IGHG1P01857 330 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 TNFSF4P23510 183 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 RGS8P57771 180 aaPredicted RBP10.67□□□□□ -0.7
SS18-219ENST00000581570 CDK5R2Q13319 367 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 Q6YL49 198 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 RFPL4BQ6ZWI9 263 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 MUC20Q8N307 709 aaPredicted RBP10.67□□□□□ -0.7
SS18-219ENST00000581570 TMEM86BQ8N661 226 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 EIF1ADQ8N9N8 165 aaKnown RBP10.67□□□□□ -0.7
SS18-219ENST00000581570 AKR7LQ8NHP1 331 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 ITCHQ96J02 903 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 SIGLEC11Q96RL6 698 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 ZNF347Q96SE7 839 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 SPATA5L1Q9BVQ7 753 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 RAD21L1Q9H4I0 556 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 SIAEQ9HAT2 523 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 TCF7L1Q9HCS4 588 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 PNPOQ9NVS9 261 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 LGALS13Q9UHV8 139 aa10.67□□□□□ -0.7
SS18-219ENST00000581570 CLIC1O00299 241 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 TPST2O60704 377 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 SLC22A3O75751 556 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 CLPXO76031 633 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 CH25HO95992 272 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 BMP2P12643 396 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 ZNF32P17041 273 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 CPT2P23786 658 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 BPIFB3P59826 476 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 GNB2P62879 340 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 ZNF74Q16587 644 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 HIST3H3Q16695 136 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 C6orf10Q5SRN2 563 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 ZNF620Q6ZNG0 422 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 ZER1Q7Z7L7 766 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 KRT73Q86Y46 540 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 OR2Z1Q8NG97 314 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 LINC01006Q8NI28 216 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 NFKBIDQ8NI38 313 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 ITLN1Q8WWA0 313 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 FAM71F1Q96KD3 344 aaPredicted RBP10.66□□□□□ -0.7
SS18-219ENST00000581570 WFDC6Q9BQY6 131 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 NANSQ9NR45 359 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 ASH2LQ9UBL3 628 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.66□□□□□ -0.7
SS18-219ENST00000581570 HAO1Q9UJM8 370 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 SLC13A4Q9UKG4 626 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 PPP1R3CQ9UQK1 317 aa10.66□□□□□ -0.7
SS18-219ENST00000581570 KIR2DS1A0A191URI9 304 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 TMEM178BH3BS89 294 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 BIRC5O15392 142 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 HIST1H2ABP04908 130 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 MELTFP08582 738 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 RPS2P15880 293 aaKnown RBP10.65□□□□□ -0.7
SS18-219ENST00000581570 CDAP32320 146 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 ARHGDIAP52565 204 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 RPL15P61313 204 aaKnown RBP10.65□□□□□ -0.7
SS18-219ENST00000581570 MRPS34P82930 218 aaKnown RBP10.65□□□□□ -0.7
SS18-219ENST00000581570 PSG4Q00888 419 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 PSG7Q13046 419 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 FADDQ13158 208 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 GPR157Q5UAW9 335 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 HHATQ5VTY9 493 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 ZNF774Q6NX45 483 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 LINC00114Q6XXX2 140 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 Q6ZPA2 131 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 MSANTD1Q6ZTZ1 278 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 HIST3H2AQ7L7L0 130 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 RANBP3LQ86VV4 465 aaPredicted RBP10.65□□□□□ -0.7
SS18-219ENST00000581570 KLBQ86Z14 1044 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 HIST1H2ACQ93077 130 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 DACT3Q96B18 629 aaPredicted RBP10.65□□□□□ -0.7
SS18-219ENST00000581570 PLEKHA8Q96JA3 519 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 MRPL13Q9BYD1 178 aaKnown RBP10.65□□□□□ -0.7
SS18-219ENST00000581570 WDR55Q9H6Y2 383 aaPredicted RBP10.65□□□□□ -0.7
SS18-219ENST00000581570 ELOVL3Q9HB03 270 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 MIOXQ9UGB7 285 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 POMT1Q9Y6A1 747 aa10.65□□□□□ -0.7
SS18-219ENST00000581570 PRORSD1PA6NEY8 169 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 SURF4O15260 269 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 PIN1P1O15428 100 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 IDO1P14902 403 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 EPHA3P29320 983 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 PROK1P58294 105 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 IFFO1Q0D2I5 559 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 STX3Q13277 289 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 TAF11Q15544 211 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 SGCAQ16586 387 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 BEAN1Q3B7T3 259 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms