RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 DEFB116Q30KQ4 102 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 PTPN20Q4JDL3 420 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 REEP3Q6NUK4 255 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 IGFL3Q6UXB1 125 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 TEX43Q6ZNM6 134 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 SLC16A14Q7RTX9 510 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 HDDC2Q7Z4H3 204 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 C12orf56Q8IXR9 622 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 PRELID2Q8N945 189 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 OR4A4PQ8NGN8 299 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 FAM81AQ8TBF8 368 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 LKAAEAR1Q8TD35 194 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 EXOSC8Q96B26 276 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 CHP1Q99653 195 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 LINC00597Q9H2U6 94 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 NOX3Q9HBY0 568 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 ZNF160Q9HCG1 818 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 MYOZ2Q9NPC6 264 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 ST3GAL6Q9Y274 331 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 NSD2O96028 1365 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 INS-IGF2F8WCM5 200 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 SGK1O00141 431 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 H6PDO95479 791 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 RAB3DO95716 219 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 ZNF32P17041 273 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 RRM2P31350 389 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 CEACAM6P40199 344 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 CCNA1P78396 465 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 MXD1Q05195 221 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 SELENBP1Q13228 472 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 PTGES3Q15185 160 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 C22orf42Q6IC83 251 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 DNAJC24Q6P3W2 148 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 CERS6Q6ZMG9 384 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 CMTM1Q8IZ96 169 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 DUS3LQ96G46 650 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 PANX1Q96RD7 426 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 NEUROG2Q9H2A3 272 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 TMEM185BQ9H7F4 350 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 LHX9Q9NQ69 397 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 RAB20Q9NX57 234 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 PTTG3PQ9NZH4 202 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 VANGL2Q9ULK5 521 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 PSG8Q9UQ74 426 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 ARID1AO14497 2285 aa2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 MN1Q10571 1320 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-205ENST00000581383 CARMIL3Q8ND23 1372 aa2.9□□□□□ -1.94
SMCHD1-205ENST00000581383 A0A075B6Q4 140 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 TRBV11-1A0A0K0K1C0 115 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 DNALI1O14645 258 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 MAGEB4O15481 346 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 CDH16O75309 829 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 GABARAPO95166 117 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 KRT14P02533 472 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 ACSM4P0C7M7 580 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 TLX1NBP0CAT3 122 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 SLC1A1P43005 524 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 SYKP43405 635 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 PRRX1P54821 245 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 C21orf59P57076 290 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 RGS8P57771 180 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 MAB21L1Q13394 359 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 GINS1Q14691 196 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 TFDP3Q5H9I0 405 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 FAM92BQ6ZTR7 304 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 CENPQQ7L2Z9 268 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 ZFP41Q8N8Y5 198 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 OR4C5Q8NGB2 326 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 OR10G4Q8NGN3 311 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 STARD4Q96DR4 205 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 PATZ1Q9HBE1 687 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 LGALS13Q9UHV8 139 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 PSG11Q9UQ72 335 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 ASTN1O14525 1302 aa2.9□□□□□ -1.95
SMCHD1-205ENST00000581383 SIRPB1O00241 398 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 NUPL2O15504 423 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 KLHL41O60662 606 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 ENTPD5O75356 428 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 MED6O75586 246 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 IGKV3-11P04433 115 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 TPM2P07951 284 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 ZNF823P16415 610 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 EIF2S2P20042 333 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 GTF2E2P29084 291 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 OTX1P32242 354 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 GPX4P36969 197 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 CX3CR1P49238 355 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 MNAT1P51948 309 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 RND2P52198 227 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 RAB10P61026 200 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 SLAQ13239 276 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 EBI3Q14213 229 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 RGNQ15493 299 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 SPANXN2Q5MJ10 180 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 KHDRBS2Q5VWX1 349 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 AKNAQ7Z591 1439 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 IQCKQ8N0W5 287 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 FAM86B1Q8N7N1 296 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 CYB561D1Q8N8Q1 229 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 CCDC148Q8NFR7 591 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms