RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ABOP16442 354 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 NKX2-1P43699 371 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 CSNK1G2P78368 415 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 MARCH3Q86UD3 253 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 S100A8P05109 93 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 SBK2P0C263 348 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 P2RX3P56373 397 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 MANEAQ5SRI9 462 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 ABHD17CQ6PCB6 329 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 DBX2Q6ZNG2 339 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 NKAIN4Q8IVV8 208 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 TCTE3Q8IZS6 198 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 OR5M8Q8NGP6 311 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 ZNF331Q9NQX6 463 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 PADI1Q9ULC6 663 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 COA3Q9Y2R0 106 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 TMEM52BQ4KMG9 183 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 UCN3Q969E3 161 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 PARP12Q9H0J9 701 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 LYRM4Q9HD34 91 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 PRELID3BQ9Y3B1 194 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 SNRPGP15A8MWD9 76 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 ANGPTL7O43827 346 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 NPPBP16860 134 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 KCNJ15Q99712 375 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 SPNS1Q9H2V7 528 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 KIR3DX1Q9H7L2 352 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 SLC25A19Q9HC21 320 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 RGPD5Q99666 1765 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 DVL1O14640 695 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 CYTIPO60759 359 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 NXPH2O95156 264 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 TGFBR1P36897 503 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 DVL1P1P54792 670 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 ZNF85Q03923 595 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 C1orf140Q5VVS0 124 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 ADIPOR2Q86V24 386 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 MFSD4AQ8N468 514 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 OR1M1Q8NGA1 313 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 OR10J5Q8NHC4 309 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 SLC35D1Q9NTN3 355 aa13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 DNMT3BQ9UBC3 853 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-217ENST00000581241 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 K7EQM0 130 aa13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 MTHFD2P13995 350 aa13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 SPNP16150 400 aa13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 CARD18P57730 90 aa13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 UBE2G2P60604 165 aa13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 UBE2IP63279 158 aaKnown RBP13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 EMC4Q5J8M3 183 aa13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 FCRL6Q6DN72 434 aa13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 KDF1Q8NAX2 398 aaPredicted RBP13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 OPALINQ96PE5 141 aa13.33□□□□□ -0.27
CSNK1D-217ENST00000581241 TMX2-CTNND1H3BSU7 103 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 ICAM2P13598 275 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 ACKR3P25106 362 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 YOD1Q5VVQ6 348 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 OR8G2PQ6IF36 304 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 RHOUQ7L0Q8 258 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 GNPNAT1Q96EK6 184 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 OCEL1Q9H607 264 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 NDRG3Q9UGV2 375 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 IGLV3-10A0A075B6K4 115 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 HMX2A2RU54 273 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 PLPP1O14494 284 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 ST8SIA3O43173 380 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 SCRG1O75711 98 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 EIF1P41567 113 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 OLIG3Q7RTU3 272 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 GJC3Q8NFK1 279 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 ATF6BQ99941 703 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 BANF2Q9H503 90 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 DYNLRB1Q9NP97 96 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 OR5H14A6NHG9 310 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 CD46P15529 392 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 MGMTP16455 207 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 FCGR2CP31995 323 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 EMG1Q92979 244 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 BCO1Q9HAY6 547 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 P2RX1P51575 399 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 RPUSD3Q6P087 351 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 PAQR6Q6TCH4 344 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 TMEM231Q9H6L2 316 aa13.33□□□□□ -0.28
CSNK1D-217ENST00000581241 SPINT2O43291 252 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CALCRP30988 508 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 SEMA3BQ13214 749 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 HAGHQ16775 308 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 TMEM64Q6YI46 380 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 H2BFWTQ7Z2G1 175 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 GLCCI1Q86VQ1 547 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CMTM4Q8IZR5 234 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 CMTM2Q8TAZ6 248 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 TSLPQ969D9 159 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 TPPP3Q9BW30 176 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 ZNF816-ZNF321PA0A0X1KG74 233 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 ZNF587BE7ETH6 402 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 TO15178 435 aa13.32□□□□□ -0.28
CSNK1D-217ENST00000581241 SLC2A10O95528 541 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms