RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 IMPA2O14732 288 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 AIM2O14862 343 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 BCKDKO14874 412 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 COCHO43405 550 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 SCGNO76038 276 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 TSPAN12O95859 305 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 ASS1P00966 412 aaKnown RBP3.6□□□□□ -1.83
NUP88-213ENST00000576862 FTH1P02794 183 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 PROS1P07225 676 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 ANXA5P08758 320 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 MLNP12872 115 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 POLR2EP19388 210 aaKnown RBP3.6□□□□□ -1.83
NUP88-213ENST00000576862 ACVR1BP36896 505 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 P2RY2P41231 377 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 CASP4P49662 377 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 CEBPGP53567 150 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 MYBPC1Q00872 1141 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 SP4Q02446 784 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 PUDPQ08623 228 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 STX5Q13190 355 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 NME3Q13232 169 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 ELAVL3Q14576 367 aaKnown RBP3.6□□□□□ -1.83
NUP88-213ENST00000576862 CCL15Q16663 113 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 C2orf83Q53S99 150 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 ZNF470Q6ECI4 717 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 PNCKQ6P2M8 343 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 SLC39A4Q6P5W5 647 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 HACD2Q6Y1H2 254 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 SLC35D2Q76EJ3 337 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 ZNF720Q7Z2F6 126 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 SNX20Q7Z614 316 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 SLC26A11Q86WA9 606 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 TGIF2LXQ8IUE1 241 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 C9orf40Q8IXQ3 194 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 OR5T3Q8NGG3 340 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 ING5Q8WYH8 240 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 ELMO1Q92556 727 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 CCDC124Q96CT7 223 aaKnown RBP3.6□□□□□ -1.83
NUP88-213ENST00000576862 ZNF514Q96K75 400 aaPredicted RBP3.6□□□□□ -1.83
NUP88-213ENST00000576862 GLT1D1Q96MS3 346 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 VPS35Q96QK1 796 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 CGREF1Q99674 301 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 OMDQ99983 421 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 CNPY3Q9BT09 278 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 POLR3FQ9H1D9 316 aaPredicted RBP3.6□□□□□ -1.83
NUP88-213ENST00000576862 PORCNQ9H237 461 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 CALHM2Q9HA72 323 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 C12orf10Q9HB07 376 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 CCNB1IP1Q9NPC3 277 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 XPNPEP1Q9NQW7 623 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 C20orf96Q9NUD7 363 aaPredicted RBP3.6□□□□□ -1.83
NUP88-213ENST00000576862 DCAF13Q9NV06 445 aaKnown RBP3.6□□□□□ -1.83
NUP88-213ENST00000576862 AHSPQ9NZD4 102 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 NAGKQ9UJ70 344 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 ZNF229Q9UJW7 825 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 FZR1Q9UM11 496 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 B9D1Q9UPM9 204 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 PLLPQ9Y342 182 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 FKBP7Q9Y680 259 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 NFASCO94856 1347 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 ARFGEF1Q9Y6D6 1849 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 TCHHQ07283 1943 aa3.6□□□□□ -1.83
NUP88-213ENST00000576862 IGKV6D-21A0A0A0MT36 114 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 A0A0A6YYH2 397 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 A6NJ64 397 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 ADAM12O43184 909 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 STX10O60499 249 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 OR2F2O95006 317 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 SLC25A27O95847 323 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 HSPB1P04792 205 aaKnown RBP3.59□□□□□ -1.83
NUP88-213ENST00000576862 HMGN1P05114 100 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 KRT7P08729 469 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 H2AFZP0C0S5 128 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 SDC1P18827 310 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 ZP3P21754 424 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 PRDX2P32119 198 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 CDKN2CP42773 168 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 PTGFRP43088 359 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 TGM4P49221 684 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 TUFMP49411 452 aaKnown RBP3.59□□□□□ -1.83
NUP88-213ENST00000576862 P2RY4P51582 365 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 BDH1Q02338 343 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 PAX5Q02548 391 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 GLO1Q04760 184 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 ENPEPQ07075 957 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 IFFO1Q0D2I5 559 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 CDC20Q12834 499 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 CDH17Q12864 832 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 RAB35Q15286 201 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 TGFBIQ15582 683 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 KYAT1Q16773 422 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 C18orf21Q32NC0 220 aaPredicted RBP3.59□□□□□ -1.83
NUP88-213ENST00000576862 DCAF4L1Q3SXM0 396 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 C6orf226Q5I0X4 101 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 CDKL4Q5MAI5 379 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 CST9Q5W186 159 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 ZNF57Q68EA5 555 aaPredicted RBP3.59□□□□□ -1.83
NUP88-213ENST00000576862 ASPHD2Q6ICH7 369 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 UFSP1Q6NVU6 142 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 H3F3CQ6NXT2 135 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms