RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TRAPPC2LH3BP13 241 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 TIMM8AO60220 97 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ACADSP16219 412 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZNF32P17041 273 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 GPX2P18283 190 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 TNFRSF1AP19438 455 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 MDKP21741 143 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 SLC6A9P48067 706 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ARHGDIAP52565 204 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZNF133P52736 654 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 PPP1CBP62140 327 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 BTG1P62324 171 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 SLC9A3R2Q15599 337 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ESCO2Q56NI9 601 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 TNFAIP8L3Q5GJ75 292 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 WDR93Q6P2C0 686 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 LEG1Q6P5S2 330 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ARL9Q6T311 187 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 RFPL4BQ6ZWI9 263 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 SPATC1Q76KD6 591 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 MAVSQ7Z434 540 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 CROCCP2Q86T23 111 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ALDH16A1Q8IZ83 802 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 PARP8Q8N3A8 854 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 OR52E2Q8NGJ4 325 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 OR6T1Q8NGN1 323 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ASB10Q8WXI3 467 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 TMIGD2Q96BF3 282 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 SPDL1Q96EA4 605 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 SEPHS2Q99611 448 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ARHGDIGQ99819 225 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 SMURF2Q9HAU4 748 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 ELOVL3Q9HB03 270 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 MSL2Q9HCI7 577 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 TMEM106BQ9NUM4 274 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 VAPAQ9P0L0 249 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 SLAMF8Q9P0V8 285 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 EGFL7Q9UHF1 273 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 SLC7A7Q9UM01 511 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 NOTCH1P46531 2555 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 LOC100509620A0A075B734 347 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 A0A1B0GUS0 222 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 TMEM120BA0PK00 339 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 ICMTO60725 284 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 TRMUO75648 421 aaKnown RBP9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 SLC2A10O95528 541 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 F13BP05160 661 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 PPIAL4GP0DN37 164 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 CDAP32320 146 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 MRPL19P49406 292 aaKnown RBP9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 WDR4P57081 412 aaKnown RBP9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 RPL18Q07020 188 aaKnown RBP9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 TAF11Q15544 211 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 SGCAQ16586 387 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 DUSP7Q16829 419 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 MTX3Q5HYI7 312 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 TMEM255AQ5JRV8 349 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 BLOC1S3Q6QNY0 202 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 C17orf107Q6ZR85 190 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 C9orf139Q6ZV77 190 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 LRRC28Q86X40 367 aaPredicted RBP9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 MUC20Q8N307 709 aaPredicted RBP9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZNF283Q8N7M2 679 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 C11orf65Q8NCR3 313 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 AKR7LQ8NHP1 331 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZNF426Q9BUY5 554 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 NANOGQ9H9S0 305 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 CCDC167Q9P0B6 97 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 IL20RAQ9UHF4 553 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 KLHL21Q9UJP4 597 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 LRCH1Q9Y2L9 728 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 MMP24Q9Y5R2 645 aa9.81□□□□□ -0.84
CTDNEP1-212ENST00000576613 TRBV5-3A0A0A0MS03 114 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 SURF4O15260 269 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 POLR3GO15318 223 aaPredicted RBP9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 TGDSO95455 350 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 KNG1P01042 644 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 OPN1SWP03999 348 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 CD247P20963 164 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 GSTM3P21266 225 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 PCGF2P35227 344 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 MDH2P40926 338 aaKnown RBP9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 GUCA1AP43080 201 aaPredicted RBP9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 UGT2B15P54855 530 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 PCBP3P57721 371 aaKnown RBP9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 PCBD1P61457 104 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 SEC61A1P61619 476 aaKnown RBP9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 ERVK-25P63136 954 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 PSG4Q00888 419 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 CD47Q08722 323 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 CDK5R2Q13319 367 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 NPTX1Q15818 432 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 CYP51A1Q16850 503 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 PAGE3Q5JUK9 113 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZNF362Q5T0B9 420 aaPredicted RBP9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 FAM27BQ5VT28 67 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 C16orf87Q6PH81 154 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 BTNL3Q6UXE8 466 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 NPEPL1Q8NDH3 523 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms