RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SSMEM1Q8WWF3 244 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 MAL2Q969L2 176 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 MCHR2Q969V1 340 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 NUDT16L1Q9BRJ7 211 aaKnown RBP13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 NUF2Q9BZD4 464 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 PPCSQ9HAB8 311 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 TMEM27Q9HBJ8 222 aa13.59□□□□□ -0.23
CTDNEP1-211ENST00000575783 H0YL77 283 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 TMEM178BH3BS89 294 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 PCBP3P57721 371 aaKnown RBP13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 BPIFB3P59826 476 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 RPL15P61313 204 aaKnown RBP13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 NCALDP61601 193 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 OR1Q1Q15612 314 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 NRN1LQ496H8 165 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 RUNDC3AQ59EK9 446 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 SLC27A4Q6P1M0 643 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 ITLN1Q8WWA0 313 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 PLEKHA8Q96JA3 519 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 ZNF347Q96SE7 839 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 ZBTB18Q99592 522 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 RHOXF2Q9BQY4 288 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 PCGF1Q9BSM1 259 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 BCL2L10Q9HD36 194 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 THUMPD1Q9NXG2 353 aaKnown RBP13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 TAS2R5Q9NYW4 299 aa13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.58□□□□□ -0.24
CTDNEP1-211ENST00000575783 C5orf58C9J3I9 102 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 MT-ATP6P00846 226 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 IGHV4-59P01825 116 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 IGHG1P01857 330 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 ALDOCP09972 364 aaKnown RBP13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 ZNF32P17041 273 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 PRKAR1BP31321 381 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 CDAP32320 146 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 CDH12P55289 794 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 PSG7Q13046 419 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 GTDC1Q4AE62 458 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 NUDCD3Q8IVD9 361 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 BBS10Q8TAM1 723 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 VPS33AQ96AX1 596 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 DACT3Q96B18 629 aaPredicted RBP13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 SIAEQ9HAT2 523 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 TMEM165Q9HC07 324 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 A4GALTQ9NPC4 353 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 MIOXQ9UGB7 285 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 TENM3Q9P273 2699 aa13.57□□□□□ -0.24
CTDNEP1-211ENST00000575783 A0A0B4J2E0 115 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 A0A1B0GX12 115 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 WDR91A4D1P6 747 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 TPST1O60507 370 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 CH25HO95992 272 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 ARHGDIAP52565 204 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 PSG4Q00888 419 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 TAF11Q15544 211 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 SGCAQ16586 387 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 Q6ZR03 302 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 Q6ZSV7 163 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 ZER1Q7Z7L7 766 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 FITM2Q8N6M3 262 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 NEIL1Q96FI4 390 aaPredicted RBP13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 TMEM43Q9BTV4 400 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 RASSF4Q9H2L5 321 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 AIG1Q9NVV5 245 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 IL19Q9UHD0 177 aa13.56□□□□□ -0.24
CTDNEP1-211ENST00000575783 TNFRSF13BO14836 293 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 SURF4O15260 269 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 OPN1MWP04001 364 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 OPN1MW2P0DN77 364 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 OPN1MW3P0DN78 364 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 RPL14P50914 215 aaKnown RBP13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 RGS8P57771 180 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 ABCE1P61221 599 aaKnown RBP13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 ERVK-25P63136 954 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 ZSCAN4Q8NAM6 433 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 PKNOX2Q96KN3 472 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 OR2V2Q96R30 315 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 CDADC1Q9BWV3 514 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 GCM1Q9NP62 436 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 MAN2C1Q9NTJ4 1040 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 KIF17Q9P2E2 1029 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
CTDNEP1-211ENST00000575783 H3BSA7 217 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 MGRN1O60291 552 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 TPST2O60704 377 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 CYB5R3P00387 301 aaPredicted RBP13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 SFTPBP07988 381 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 ZCCHC18P0CG32 403 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 ETS2P15036 469 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 CPT2P23786 658 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 PITPNBP48739 271 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 MMP16P51512 607 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 BST1Q10588 318 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 RGNQ15493 299 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 HIST3H3Q16695 136 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 NLRC3Q7RTR2 1065 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 OR8B3Q8NGG8 313 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 ZNF420Q8TAQ5 688 aaPredicted RBP13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 GATAD2BQ8WXI9 593 aa13.54□□□□□ -0.24
CTDNEP1-211ENST00000575783 C4orf45Q96LM5 186 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms