RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ZNF627Q7L945 461 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 MDGA2Q7Z553 956 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 PNO1Q9NRX1 252 aaKnown RBP17.18■□□□□ 0.34
SCARF1-206ENST00000573852 GON4LQ3T8J9 2241 aa17.18■□□□□ 0.34
SCARF1-206ENST00000573852 ARID1BQ8NFD5 2236 aaPredicted RBP17.17■□□□□ 0.34
SCARF1-206ENST00000573852 ATP6V1G2-DDX39BF2Z307 99 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 XKRYO14609 159 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 ICOSLGO75144 302 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 PMS2P2O95744 297 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 MELTFP08582 738 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 SPARCP09486 303 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 PPICP45877 212 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 TAS2R19P59542 299 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 ACTBP60709 375 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 ACTG1P63261 375 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 NR0B2Q15466 257 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 CFAP77Q6ZQR2 320 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 ASB5Q8WWX0 329 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 SLC25A36Q96CQ1 311 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 CGGBP1Q9UFW8 167 aaPredicted RBP17.17■□□□□ 0.34
SCARF1-206ENST00000573852 DHDHQ9UQ10 334 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 PCNX3Q9H6A9 2034 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 ALOX12BO75342 701 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 CTSEP14091 401 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 GLYATL3Q5SZD4 288 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 FAM122CQ6P4D5 195 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 EIF4E3Q8N5X7 224 aaKnown RBP17.17■□□□□ 0.34
SCARF1-206ENST00000573852 OR52H1Q8NGJ2 320 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 ADAMTS18Q8TE60 1221 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 RELTQ969Z4 430 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 MRPS24Q96EL2 167 aaKnown RBP17.17■□□□□ 0.34
SCARF1-206ENST00000573852 LDAHQ9H6V9 325 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 TAS2R4Q9NYW5 299 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 MYEF2Q9P2K5 600 aaKnown RBP17.17■□□□□ 0.34
SCARF1-206ENST00000573852 MRPS18BQ9Y676 258 aaKnown RBP17.17■□□□□ 0.34
SCARF1-206ENST00000573852 TMEM131Q92545 1883 aa17.17■□□□□ 0.34
SCARF1-206ENST00000573852 HCRTR2O43614 444 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 SLC16A7O60669 478 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 SEMA4FO95754 770 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 IGHV4-34P06331 123 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 ACHEP22303 614 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 CXCR1P25024 350 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 INSM1Q01101 510 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-206ENST00000573852 FZD2Q14332 565 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 ATRAIDQ6UW56 229 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 NUP54Q7Z3B4 507 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 ZNF546Q86UE3 836 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 TMEM229BQ8NBD8 167 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 METTL21AQ8WXB1 218 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 THRSPQ92748 146 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 C8orf44Q96CB5 159 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 SLC41A2Q96JW4 573 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 LAT2Q9GZY6 243 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 ZMAT3Q9HA38 289 aaKnown RBP17.16■□□□□ 0.34
SCARF1-206ENST00000573852 FBXO4Q9UKT5 387 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 A0A1W2PPC1 479 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 TCRBV21S2A2A0A5A6 115 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 PRSS37A4D1T9 235 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 SMAD9O15198 467 aaKnown RBP17.16■□□□□ 0.34
SCARF1-206ENST00000573852 DOK2O60496 412 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 AMY2AP04746 511 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 MAOBP27338 520 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 HTR2CP28335 458 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 ACKR1Q16570 336 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 STEAP2Q8NFT2 490 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 CCDC107Q8WV48 283 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 OR8D2Q9GZM6 311 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 UPB1Q9UBR1 384 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 GLS2Q9UI32 602 aa17.16■□□□□ 0.34
SCARF1-206ENST00000573852 SPTY2D1-AS1A0A0U1RR47 76 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 TTLL8A6PVC2 850 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 TSPAN9O75954 239 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 ZNF735P0CB33 412 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 GABRG2P18507 467 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 SLC18B1Q6NT16 456 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 OR51A2Q8NGJ7 313 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 OR1J2Q8NGS2 313 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 ASB17Q8WXJ9 295 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 POTEKPQ9BYX7 375 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 NRSN2Q9GZP1 204 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 WDR13Q9H1Z4 485 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 SIGLEC5O15389 551 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 PBX2P40425 430 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 SIGLEC14Q08ET2 396 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 SERTAD2Q14140 314 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 TOMM20Q15388 145 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 FAM74A1Q5RGS3 127 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 ATPAF1Q5TC12 328 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-206ENST00000573852 GLT8D1Q68CQ7 371 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 OR10K2Q6IF99 312 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 C17orf107Q6ZR85 190 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 ASB13Q8WXK3 278 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 ST8SIA2Q92186 375 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 PMEPA1Q969W9 287 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 PRMT8Q9NR22 394 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-206ENST00000573852 KIF26BQ2KJY2 2108 aa17.15■□□□□ 0.34
SCARF1-206ENST00000573852 TRAV36DV7A0A075B6V5 113 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 IGLV1-36A0A0B4J1U3 117 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 CDC14CA4D256 554 aa17.14■□□□□ 0.34
SCARF1-206ENST00000573852 PRAMEF26H0Y7S4 382 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms