RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KCTD14Q9BQ13 255 aaPredicted RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 MRPL13Q9BYD1 178 aaKnown RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 FAM107BQ9H098 131 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 NSRP1Q9H0G5 558 aaKnown RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 RAB1BQ9H0U4 201 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 PLK3Q9H4B4 646 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 ZNF442Q9H7R0 627 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 RNF121Q9H920 327 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 NOX3Q9HBY0 568 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 MBNL3Q9NUK0 354 aaKnown RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 TMEM38BQ9NVV0 291 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 ZNF224Q9NZL3 707 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 STX18Q9P2W9 335 aaKnown RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 RHCGQ9UBD6 479 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 CMAHPQ9Y471 501 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 PLCE1Q9P212 2302 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 TMEM129A0AVI4 362 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 CENPBD1B2RD01 187 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 hCG_2039718K7EN88 272 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 FFAR1O14842 300 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 GPRIN2O60269 458 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 MGRN1O60291 552 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 PIP5K1CO60331 668 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 GMNNO75496 209 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 FARS2O95363 451 aaKnown RBP6.41□□□□□ -1.38
NUP88-205ENST00000572809 AMY2AP04746 511 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 SERPINA5P05154 406 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 ZNF35P13682 527 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 SLC25A16P16260 332 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 NCK1P16333 377 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 AMY2BP19961 511 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 MAKP20794 623 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 DRD4P21917 467 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 CFPP27918 469 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 LSP1P33241 339 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 GLRXP35754 106 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 PPOXP50336 477 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 PDLIM4P50479 330 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 CTXN1P60606 82 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 GALK2Q01415 458 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 MVKQ03426 396 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 RUNX1T1Q06455 604 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 KRTAP1-1Q07627 177 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 LOXL1Q08397 574 aaPredicted RBP6.41□□□□□ -1.38
NUP88-205ENST00000572809 SNTB2Q13425 540 aaKnown RBP6.41□□□□□ -1.38
NUP88-205ENST00000572809 TAF11Q15544 211 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 ANKDD1AQ495B1 522 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 SLC36A2Q495M3 483 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 NRN1LQ496H8 165 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 ALG10Q5BKT4 473 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 ARMC4Q5T2S8 1044 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 TMEM53Q6P2H8 277 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 TBPL2Q6SJ96 375 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 RRM2BQ7LG56 351 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 SLC16A14Q7RTX9 510 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 HDDC2Q7Z4H3 204 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 DPPA2Q7Z7J5 298 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 OAFQ86UD1 273 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 CYP4Z1Q86W10 505 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 NRMQ8IXM6 262 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 LRRC18Q8N456 261 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 OR4K5Q8NGD3 323 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 OR51A7Q8NH64 312 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 C10orf105Q8TEF2 133 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 GEMIN6Q8WXD5 167 aaKnown RBP6.41□□□□□ -1.38
NUP88-205ENST00000572809 TNFRSF13CQ96RJ3 184 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 SEPHS2Q99611 448 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 KCNN2Q9H2S1 579 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 TXNIPQ9H3M7 391 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 ABCD2Q9UBJ2 740 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 RPS6KA6Q9UK32 745 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 FBXL3Q9UKT7 428 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 ZNF346Q9UL40 294 aaKnown RBP6.41□□□□□ -1.38
NUP88-205ENST00000572809 FAM32AQ9Y421 112 aaKnown RBP6.41□□□□□ -1.38
NUP88-205ENST00000572809 FKBP7Q9Y680 259 aa6.41□□□□□ -1.38
NUP88-205ENST00000572809 A0A087WUU8 490 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 A0A096LNT2 108 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 LOC390937A0A1W2PQ73 354 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 NPIPB13A6NJU9 1138 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 EFCAB9A8MZ26 197 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 NPIPB4C9JG80 1138 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 NDUFS8O00217 210 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 TLX2O43763 284 aaPredicted RBP6.4□□□□□ -1.38
NUP88-205ENST00000572809 CD5LO43866 347 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 PRSS23O95084 383 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 PTHP01270 115 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 ERCC1P07992 297 aaPredicted RBP6.4□□□□□ -1.38
NUP88-205ENST00000572809 ADRA2AP08913 450 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 CSF3P09919 207 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 SAGP10523 405 aaPredicted RBP6.4□□□□□ -1.38
NUP88-205ENST00000572809 GDNFP39905 211 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 GUCA1AP43080 201 aaPredicted RBP6.4□□□□□ -1.38
NUP88-205ENST00000572809 SLC9A3P48764 834 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 EVX1P49640 407 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 ZNF133P52736 654 aaPredicted RBP6.4□□□□□ -1.38
NUP88-205ENST00000572809 RPL27P61353 136 aaKnown RBP6.4□□□□□ -1.38
NUP88-205ENST00000572809 PLP2Q04941 152 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 CARTPTQ16568 116 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 SGCAQ16586 387 aa6.4□□□□□ -1.38
NUP88-205ENST00000572809 THEM4Q5T1C6 240 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms