RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 DUX5Q96PT3 197 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 SEPHS2Q99611 448 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 MRI1Q9BV20 369 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 MRPL13Q9BYD1 178 aaKnown RBP16.06■□□□□ 0.16
SCARF1-204ENST00000570902 FGFR1OP2Q9NVK5 253 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 ZNF69Q9UC07 566 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.06■□□□□ 0.16
SCARF1-204ENST00000570902 POLR3KQ9Y2Y1 108 aaPredicted RBP16.06■□□□□ 0.16
SCARF1-204ENST00000570902 NPTNQ9Y639 398 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 ZSCAN5BA6NJL1 495 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 H3BSA7 217 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 CLDN34H7C241 214 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 KPNA4O00629 521 aaPredicted RBP16.05■□□□□ 0.16
SCARF1-204ENST00000570902 ATP8B1O43520 1251 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 IGHMP01871 453 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 MPV17P39210 176 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 GDI2P50395 445 aaKnown RBP16.05■□□□□ 0.16
SCARF1-204ENST00000570902 MRPS34P82930 218 aaKnown RBP16.05■□□□□ 0.16
SCARF1-204ENST00000570902 ZNF154Q13106 437 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 C10orf128Q5T292 105 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 KLHL36Q8N4N3 616 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 OR6T1Q8NGN1 323 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 SLC25A40Q8TBP6 338 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 KLF14Q8TD94 323 aaPredicted RBP16.05■□□□□ 0.16
SCARF1-204ENST00000570902 ADAMTS16Q8TE57 1224 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 POM121L2Q96KW2 1035 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 C1QTNF5Q9BXJ0 243 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 TMEM120AQ9BXJ8 343 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 SLITRK2Q9H156 845 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 IKZF5Q9H5V7 419 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 STX18Q9P2W9 335 aaKnown RBP16.05■□□□□ 0.16
SCARF1-204ENST00000570902 TGP01266 2768 aa16.05■□□□□ 0.16
SCARF1-204ENST00000570902 TRBV5-3A0A0A0MS03 114 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 C5orf49A4QMS7 147 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 TRAPPC13A5PLN9 417 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 BLOC1S5-TXNDC5H3BN57 136 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 IGHV2-70P01814 119 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 CD55P08174 381 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 SBK2P0C263 348 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 TROVE2P10155 538 aaKnown RBP eCLIP16.04■□□□□ 0.16
SCARF1-204ENST00000570902 ACADSP16219 412 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 ZNF12P17014 697 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 WNT5AP41221 380 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 DAP3P51398 398 aaKnown RBP16.04■□□□□ 0.16
SCARF1-204ENST00000570902 ZNF133P52736 654 aaPredicted RBP16.04■□□□□ 0.16
SCARF1-204ENST00000570902 NPTX1Q15818 432 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 DUSP7Q16829 419 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 C11orf65Q8NCR3 313 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 GEMIN6Q8WXD5 167 aaKnown RBP16.04■□□□□ 0.16
SCARF1-204ENST00000570902 C1orf147Q96MC9 270 aaPredicted RBP16.04■□□□□ 0.16
SCARF1-204ENST00000570902 ZNF426Q9BUY5 554 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 OR2J1Q9GZK6 312 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 MMP26Q9NRE1 261 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 SLC7A7Q9UM01 511 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 NDUFAF1Q9Y375 327 aa16.04■□□□□ 0.16
SCARF1-204ENST00000570902 ANGPT2O15123 496 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 TRMUO75648 421 aaKnown RBP16.03■□□□□ 0.16
SCARF1-204ENST00000570902 LYPD3O95274 346 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 ZNF32P17041 273 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 PCBP3P57721 371 aaKnown RBP16.03■□□□□ 0.16
SCARF1-204ENST00000570902 TMEM155Q4W5P6 130 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 MIDNQ504T8 468 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 TMEM255AQ5JRV8 349 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 KLF17Q5JT82 389 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-204ENST00000570902 CGB2Q6NT52 195 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 DLEU7Q6UYE1 221 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 ABHD4Q8TB40 342 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 ASB10Q8WXI3 467 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 CCDC134Q9H6E4 229 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 SMURF2Q9HAU4 748 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 KLHL21Q9UJP4 597 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 INSIG2Q9Y5U4 225 aa16.03■□□□□ 0.16
SCARF1-204ENST00000570902 TANC2Q9HCD6 1990 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 LOC100509620A0A075B734 347 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 GMNCA6NCL1 334 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 TRAPPC2LH3BP13 241 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 THY1P04216 161 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 F13BP05160 661 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 NR2C1P13056 603 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 MDH1P40925 334 aaKnown RBP16.02■□□□□ 0.16
SCARF1-204ENST00000570902 MTNR1AP48039 350 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 ARHGDIAP52565 204 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 UGT2B15P54855 530 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 PPP1CBP62140 327 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 TNFAIP6P98066 277 aaPredicted RBP16.02■□□□□ 0.16
SCARF1-204ENST00000570902 RPL18Q07020 188 aaKnown RBP16.02■□□□□ 0.16
SCARF1-204ENST00000570902 METTL21CQ5VZV1 264 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 ZER1Q7Z7L7 766 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 DHDDSQ86SQ9 333 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 ALDH16A1Q8IZ83 802 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 BCL6BQ8N143 479 aaPredicted RBP16.02■□□□□ 0.16
SCARF1-204ENST00000570902 ZNF48Q96MX3 618 aaPredicted RBP16.02■□□□□ 0.16
SCARF1-204ENST00000570902 DCLRE1CQ96SD1 692 aaKnown RBP16.02■□□□□ 0.16
SCARF1-204ENST00000570902 MS4A7Q9GZW8 240 aaPredicted RBP16.02■□□□□ 0.16
SCARF1-204ENST00000570902 PATZ1Q9HBE1 687 aaKnown RBP16.02■□□□□ 0.16
SCARF1-204ENST00000570902 INIPQ9NRY2 104 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 TMEM106BQ9NUM4 274 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 EGFL7Q9UHF1 273 aa16.02■□□□□ 0.16
SCARF1-204ENST00000570902 ARHGAP32A7KAX9 2087 aa16.02■□□□□ 0.15
SCARF1-204ENST00000570902 A0A0G2JK05 382 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms