RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ACSM5Q6NUN0 579 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 ZNF544Q6NX49 715 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 KLHL24Q6TFL4 600 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 TMEM123Q8N131 208 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 MUC15Q8N387 334 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 MAPK1IP1LQ8NDC0 245 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 BCL2L2Q92843 193 aaPredicted RBP13.15□□□□□ -0.3
RAB40B-203ENST00000570676 TEX12Q9BXU0 123 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 BARX1Q9HBU1 254 aaPredicted RBP13.15□□□□□ -0.3
RAB40B-203ENST00000570676 NRIP3Q9NQ35 241 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 ADAM18Q9Y3Q7 739 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 GMPPBQ9Y5P6 360 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 A0A096LNT2 108 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 INAFM1C9JVW0 142 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 E9PQ18 207 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 H0YAE9 185 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 RPL36A-HNRNPH2H7BZ11 118 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 IDH3BO43837 385 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 KRT33AO76009 404 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 IGHMP01871 453 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 HMGN1P05114 100 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 APEHP13798 732 aaKnown RBP13.14□□□□□ -0.31
RAB40B-203ENST00000570676 IFNGR1P15260 489 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 PCSK6P29122 969 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 NOS3P29474 1203 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 GGT2P36268 569 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 RPL27P61353 136 aaKnown RBP13.14□□□□□ -0.31
RAB40B-203ENST00000570676 TUBA1BP68363 451 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 TUBA4AP68366 448 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 MYBPC1Q00872 1141 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 ROR2Q01974 943 aaKnown RBP13.14□□□□□ -0.31
RAB40B-203ENST00000570676 SLC35F1Q5T1Q4 408 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 C12orf73Q69YU5 71 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 GPR139Q6DWJ6 353 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 TUBA1AQ71U36 451 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 SLC35D2Q76EJ3 337 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 FBXL14Q8N1E6 418 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 LNX2Q8N448 690 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 TFAP2CQ92754 450 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 HRASLS5Q96KN8 279 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 Q96M85 177 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 TSPAN32Q96QS1 320 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 OR2M2Q96R28 347 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 PITX2Q99697 317 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 REG4Q9BYZ8 158 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 TXNIPQ9H3M7 391 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 TVP23BQ9NYZ1 205 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 CRNNQ9UBG3 495 aaPredicted RBP13.14□□□□□ -0.31
RAB40B-203ENST00000570676 GRHPRQ9UBQ7 328 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 ZNF346Q9UL40 294 aaKnown RBP13.14□□□□□ -0.31
RAB40B-203ENST00000570676 NDRG4Q9ULP0 352 aaKnown RBP13.14□□□□□ -0.31
RAB40B-203ENST00000570676 ATP23Q9Y6H3 246 aa13.14□□□□□ -0.31
RAB40B-203ENST00000570676 CHD3Q12873 2000 aaKnown RBP13.13□□□□□ -0.31
RAB40B-203ENST00000570676 HIVEP2P31629 2446 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 ZANQ9Y493 2812 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 YLPM1P49750 1951 aaKnown RBP13.13□□□□□ -0.31
RAB40B-203ENST00000570676 TEX13CA0A0J9YWL9 993 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 NPIPB13A6NJU9 1138 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 NPIPB4C9JG80 1138 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 H7C417 338 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 IMPA2O14732 288 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 ARPC3O15145 178 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 SLC43A1O75387 559 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 BCL10O95999 233 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 SDHAP31040 664 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 FABP6P51161 128 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 SH3BGRP55822 239 aaPredicted RBP13.13□□□□□ -0.31
RAB40B-203ENST00000570676 CDC42P60953 191 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 MELKQ14680 651 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 NHLRC1Q6VVB1 395 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 FAM122BQ7Z309 247 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 DEPDC4Q8N2C3 294 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 FAM81AQ8TBF8 368 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 RASD2Q96D21 266 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 TXNDC15Q96J42 360 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 SLC38A2Q96QD8 506 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 PRRG3Q9BZD7 231 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 SEC61A2Q9H9S3 476 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 MED29Q9NX70 200 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 RAB26Q9ULW5 256 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 MOKQ9UQ07 419 aa13.13□□□□□ -0.31
RAB40B-203ENST00000570676 A0A096LPE4 126 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 A0A1W2PPZ6 126 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 ZNF503-AS2A6NEH8 195 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 RIIAD1A6NNX1 92 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 M0R129 80 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 SSX4O60224 188 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 CLIC3O95833 236 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 TXNDC12O95881 172 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 IFNGP01579 166 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 IGLV1-44P01699 117 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 GNAO1P09471 354 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 BIDP55957 195 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 KRR1Q13601 381 aaKnown RBP13.12□□□□□ -0.31
RAB40B-203ENST00000570676 SNAPC1Q16533 368 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 PHYHD1Q5SRE7 291 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 ARMC4Q5T2S8 1044 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 ANKRD16Q6P6B7 361 aa13.12□□□□□ -0.31
RAB40B-203ENST00000570676 MYPOPQ86VE0 399 aaPredicted RBP13.12□□□□□ -0.31
RAB40B-203ENST00000570676 WDFY1Q8IWB7 410 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms