RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 TMEM246Q9BRR3 403 aa8.66□□□□□ -1.02
CTDNEP1-202ENST00000570380 ARMC7Q9H6L4 198 aa8.66□□□□□ -1.02
CTDNEP1-202ENST00000570380 GCM1Q9NP62 436 aa8.66□□□□□ -1.02
CTDNEP1-202ENST00000570380 SACSQ9NZJ4 4579 aa8.66□□□□□ -1.02
CTDNEP1-202ENST00000570380 A0A0G2JPF8 293 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 A0A0U1RQK1 487 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 HNRNPCL2B2RXH8 293 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 HNRNPCL3B7ZW38 293 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 C22orf46C9J442 243 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 H3BSA7 217 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 P2RY10O00398 339 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 TIMM8AO60220 97 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 MGRN1O60291 552 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 HNRNPCL1O60812 293 aaKnown RBP8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 CYB5R3P00387 301 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 PGA4P0DJD7 388 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 PGA3P0DJD8 388 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 HNRNPCL4P0DMR1 293 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 ADORA3P0DMS8 318 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 ETFAP13804 333 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 MMP9P14780 707 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 ZNF32P17041 273 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 TNFSF4P23510 183 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 CASQ1P31415 396 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 PITPNBP48739 271 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 MMP16P51512 607 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 MELKQ14680 651 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 DPY19L1Q2PZI1 675 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 PDCD4Q53EL6 469 aaKnown RBP8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 FOXB2Q5VYV0 432 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 WDR25Q64LD2 544 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 DHRS7BQ6IAN0 325 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 UNQ6126/PRO20091Q6UXV3 157 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 C4orf33Q8N1A6 199 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 TRIML2Q8N7C3 387 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 C11orf44Q8N8P7 122 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 OR8B3Q8NGG8 313 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 AKR7LQ8NHP1 331 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 ZNF420Q8TAQ5 688 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 DNAJA4Q8WW22 397 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 MCHR2Q969V1 340 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 TMEM19Q96HH6 336 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 PPP1R36Q96LQ0 422 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 OR8B2Q96RD0 313 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 EPYCQ99645 322 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 TOR3AQ9H497 397 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 AKTIPQ9H8T0 292 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 IL19Q9UHD0 177 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 IFT52Q9Y366 437 aa8.65□□□□□ -1.02
CTDNEP1-202ENST00000570380 IGHV1-69DA0A0B4J2H0 117 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 E9PBE3 544 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 K7EIL1 84 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 XPNPEP2O43895 674 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 ICMTO60725 284 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 SHOX2O60902 331 aaPredicted RBP8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 KRT75O95678 551 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 IGHV1-69P01742 117 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 KRT4P19013 534 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 GDI2P50395 445 aaKnown RBP8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 HIST3H3Q16695 136 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 RUNDC3AQ59EK9 446 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 FAM91A1Q658Y4 838 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 SLC35E4Q6ICL7 350 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 ULK3Q6PHR2 472 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 LYPD2Q6UXB3 125 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNF841Q6ZN19 808 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 COMTD1Q86VU5 262 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 C10orf53Q8N6V4 93 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 OR5J2Q8NH18 312 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 CFHR4Q92496 578 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 TEX37Q96LM6 180 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 OR2V2Q96R30 315 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNF347Q96SE7 839 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 TRIM15Q9C019 465 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 DPAGT1Q9H3H5 408 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 POFUT1Q9H488 388 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 TAS2R5Q9NYW4 299 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 KIF17Q9P2E2 1029 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 FBLN5Q9UBX5 448 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 CLN8Q9UBY8 286 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 FOXJ3Q9UPW0 622 aa8.64□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNF879B4DU55 563 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 ENSAO43768 121 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 TOX4O94842 621 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 OR6A2O95222 327 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 CRATP43155 626 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 CLNS1AP54105 237 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 DSTNP60981 165 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 PSG4Q00888 419 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 COL10A1Q03692 680 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNF404Q494X3 552 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 FAM201AQ5SY85 155 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 NLRC3Q7RTR2 1065 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZER1Q7Z7L7 766 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 VANGL1Q8TAA9 524 aaPredicted RBP8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 LRTOMTQ8WZ04 291 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 LHX4Q969G2 390 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 WDFY2Q96P53 400 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZIM3Q96PE6 472 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 OR52E6Q96RD3 313 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms