RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 ZNF658BQ4V348 819 aaPredicted RBP9.86□□□□□ -0.83
CLK3-226ENST00000569406 CMTM1Q8IZ96 169 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 OR5D16Q8NGK9 328 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 HLA-CQ95604 372 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 SNX22Q96L94 193 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 CLMPQ9H6B4 373 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 GULP1Q9UBP9 304 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 SHPKQ9UHJ6 478 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 TIMM10BQ9Y5J6 103 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 OR5H14A6NHG9 310 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 DHRS7CA6NNS2 312 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 TBX6O95947 436 aaPredicted RBP9.86□□□□□ -0.83
CLK3-226ENST00000569406 OPN1MWP04001 364 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 STAG3L3P0CL85 134 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 OPN1MW2P0DN77 364 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 OPN1MW3P0DN78 364 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 AOAHP28039 575 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 CHRNB4P30926 498 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 CAPZBP47756 277 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 SLC6A12P48065 614 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 UCP3P55916 312 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 ID2Q02363 134 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 TEX38Q6PEX7 206 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 SERPINA11Q86U17 422 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 AMER3Q8N944 861 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 NUDCD2Q8WVJ2 157 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 GALNT14Q96FL9 552 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 MRPL17Q9NRX2 175 aaKnown RBP9.86□□□□□ -0.83
CLK3-226ENST00000569406 ASIC5Q9NY37 505 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 SERTM1A2A2V5 107 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 TMEM202A6NGA9 273 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 SAP18O00422 153 aaKnown RBP9.86□□□□□ -0.83
CLK3-226ENST00000569406 TACR1P25103 407 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 RPE65Q16518 533 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 ZNF791Q3KP31 576 aaPredicted RBP9.86□□□□□ -0.83
CLK3-226ENST00000569406 SLC25A35Q3KQZ1 300 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 EXOSC6Q5RKV6 272 aaKnown RBP9.86□□□□□ -0.83
CLK3-226ENST00000569406 ZNF100Q8IYN0 542 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 OR13C8Q8NGS7 320 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 OR5AK3PQ8NH89 298 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 FAM216AQ8WUB2 273 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 KCTD12Q96CX2 325 aaKnown RBP9.86□□□□□ -0.83
CLK3-226ENST00000569406 TMEM169Q96HH4 297 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 CHST11Q9NPF2 352 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 THSD1Q9NS62 852 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 SLC7A11Q9UPY5 501 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 CXorf51AA0A1B0GTR3 108 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 ZNF724A8MTY0 619 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 MFNGO00587 321 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 CCSO14618 274 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 FGF16O43320 207 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 DCNP07585 359 aaKnown RBP9.85□□□□□ -0.83
CLK3-226ENST00000569406 CTSLP07711 333 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 ELFN1P0C7U0 828 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 CD79AP11912 226 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 TPT1P13693 172 aaKnown RBP9.85□□□□□ -0.83
CLK3-226ENST00000569406 HLA-GP17693 338 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 MTNR1BP49286 362 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 MESP2Q0VG99 397 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 CEBPEQ15744 281 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 XKR6Q5GH73 641 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 GALNTL5Q7Z4T8 443 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 SPRED2Q7Z698 418 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 CLECL1Q8IZS7 167 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 OR4F15Q8NGB8 312 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 OR4D9Q8NGE8 314 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 OR52I2Q8NH67 350 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 ASB11Q8WXH4 323 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 TOMM40LQ969M1 308 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 PRRX2Q99811 253 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 SLC23A2Q9UGH3 650 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 YY2O15391 372 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 CYB5BO43169 146 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 SLC25A17O43808 307 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 ALOX12BO75342 701 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 RPP14O95059 124 aaKnown RBP9.85□□□□□ -0.83
CLK3-226ENST00000569406 AIFM1O95831 613 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 PTHLHP12272 177 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 EFNB1P98172 346 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 NFATC4Q14934 902 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 IFI44LQ53G44 452 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 C22orf39Q6P5X5 142 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 TPRG1Q6ZUI0 275 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 TMPRSS11BQ86T26 416 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 OR4S1Q8NGB4 309 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 OR5D18Q8NGL1 313 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 OR1J1Q8NGS3 322 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 BRIX1Q8TDN6 353 aaKnown RBP9.85□□□□□ -0.83
CLK3-226ENST00000569406 LRRC3BQ96PB8 259 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 FTSJ1Q9UET6 329 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 PUS1Q9Y606 427 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLK3-226ENST00000569406 ARID1AO14497 2285 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.85□□□□□ -0.83
CLK3-226ENST00000569406 HEPACAM2A8MVW5 462 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 MAGEB17A8MXT2 336 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 MANBAO00462 879 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 DVL1O14640 695 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 TSPAN2O60636 221 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 ADAP1O75689 374 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 TGFB1P01137 390 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms