RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737		A0A087WUV0	522 aa	Predicted RBP	11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	TMEM233	B4DJY2	109 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	IFNL4	K9M1U5	179 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	PHYH	O14832	338 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	ZNF205	O95201	554 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	STOM	P27105	288 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	EPHA3	P29320	983 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	WNT5A	P41221	380 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	CLDN8	P56748	225 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	GNG11	P61952	73 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	PPP1CB	P62140	327 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	PUDP	Q08623	228 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	PGBD2	Q6P3X8	592 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	WDR88	Q6ZMY6	472 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	SERPINA11	Q86U17	422 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	SCAI	Q8N9R8	606 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	CCDC63	Q8NA47	563 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	ABHD4	Q8TB40	342 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	LHX4	Q969G2	390 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	R3HDM4	Q96D70	268 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	SLC41A3	Q96GZ6	507 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	TMEM246	Q9BRR3	403 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	MMP28	Q9H239	520 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	ARMC7	Q9H6L4	198 aa		11.4	□□□□□ -0.58
SMG1-213	ENST00000567737	C5orf49	A4QMS7	147 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	RNASEK-C17orf49	H0YIS7	233 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	GLRA3	O75311	464 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	RPLP1	P05386	114 aa	Known RBP	11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	LIPF	P07098	398 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	G6PD	P11413	515 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	MMP9	P14780	707 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	IGLL1	P15814	213 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	TXNL4A	P83876	142 aa	Known RBP	11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	PABPC1L2A	Q5JQF8	200 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	RNF220	Q5VTB9	566 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	METTL11B	Q5VVY1	283 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	WDR25	Q64LD2	544 aa	Predicted RBP	11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	C1orf122	Q6ZSJ8	110 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	PXK	Q7Z7A4	578 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	CLIP4	Q8N3C7	705 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	KLHDC1	Q8N7A1	406 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	OR8J2	Q8NGG1	315 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	WDFY2	Q96P53	400 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	KCNN2	Q9H2S1	579 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	PPA2	Q9H2U2	334 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	C12orf10	Q9HB07	376 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	CACYBP	Q9HB71	228 aa	Known RBP	11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	NOP53	Q9NZM5	478 aa	Known RBP	11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	KLHL14	Q9P2G3	628 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	SIGLEC9	Q9Y336	463 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	DNAH9	Q9NYC9	4486 aa		11.39	□□□□□ -0.59
SMG1-213	ENST00000567737	PRSS51	A0A1B0GVH4	220 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	C22orf46	C9J442	243 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	PROC	P04070	461 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	FGF4	P08620	206 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	MMP7	P09237	267 aa	Predicted RBP	11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	FBP1	P09467	338 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	CPA3	P15088	417 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	GDI2	P50395	445 aa	Known RBP	11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	ARHGDIA	P52565	204 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	EFNB2	P52799	333 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	UGT3A2	Q3SY77	523 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	CCDC153	Q494R4	210 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	ZNF404	Q494X3	552 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	ANXA8L1	Q5VT79	327 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	NHLRC1	Q6VVB1	395 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	RFPL4B	Q6ZWI9	263 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	LRRC34	Q8IZ02	419 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	LRRC18	Q8N456	261 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	OR6S1	Q8NH40	331 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	OR6X1	Q8NH79	312 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	ZNF566	Q969W8	418 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	POM121L2	Q96KW2	1035 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	OR2V2	Q96R30	315 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	GCM1	Q9NP62	436 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	CCNB1IP1	Q9NPC3	277 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	MAN2C1	Q9NTJ4	1040 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	TBK1	Q9UHD2	729 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737	CAB39	Q9Y376	341 aa	Predicted RBP	11.38	□□□□□ -0.59
SMG1-213	ENST00000567737		U3KQK5	164 aa		11.38	□□□□□ -0.59
SMG1-213	ENST00000567737		E9PQ18	207 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	CYB5R3	P00387	301 aa	Predicted RBP	11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	CRAT	P43155	626 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	HOXC5	Q00444	222 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	SLC7A5	Q01650	507 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	TAF11	Q15544	211 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	PDCD4	Q53EL6	469 aa	Known RBP	11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	RUNDC3A	Q59EK9	446 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	CD276	Q5ZPR3	534 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	LRFN4	Q6PJG9	635 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	C10orf82	Q8WW14	230 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	TECTB	Q96PL2	329 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	EPYC	Q99645	322 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	SPATA9	Q9BWV2	254 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	MRPL39	Q9NYK5	338 aa	Known RBP	11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	ZNRD1	Q9P1U0	126 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	TENM2	Q9NT68	2774 aa		11.37	□□□□□ -0.59
SMG1-213	ENST00000567737	IGKV1D-42	A0A075B6H8	117 aa		11.36	□□□□□ -0.59

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