RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	ALG12	Q9BV10	488 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	ANKRD19P	Q9H560	264 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	CCNB1IP1	Q9NPC3	277 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	DCAF13	Q9NV06	445 aa	Known RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	CHCHD3	Q9NX63	227 aa	Known RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	PLA2G2E	Q9NZK7	142 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	NDUFAF4	Q9P032	175 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	ABCD2	Q9UBJ2	740 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	GRHPR	Q9UBQ7	328 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	EGFL7	Q9UHF1	273 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	DUSP13	Q9UII6	198 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	GPR160	Q9UJ42	338 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	TMEM5	Q9Y2B1	443 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	UGT2A1	Q9Y4X1	527 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	ENPP4	Q9Y6X5	453 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	IGKV1D-43	A0A0B4J1Z2	117 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635		M0R233	179 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	CDC42EP2	O14613	210 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	PTP4A3	O75365	173 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	SNAP29	O95721	258 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	IFNA2	P01563	188 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	LCK	P06239	509 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	H1F0	P07305	194 aa	Known RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	CST2	P09228	141 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM157B	P0CG42	384 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	CCL2	P13500	99 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	APEH	P13798	732 aa	Known RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF250	P15622	560 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF23	P17027	643 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	STOM	P27105	288 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	APEX1	P27695	318 aa	Known RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	APLNR	P35414	380 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	RPL4	P36578	427 aa	Known RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	ALDH3B1	P43353	468 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	GPR4	P46093	362 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	UCP2	P55851	309 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	SMIM11A	P58511	58 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	PCBD1	P61457	104 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	ERVK-25	P63136	954 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	FMOD	Q06828	376 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	MOG	Q16653	247 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	CHRFAM7A	Q494W8	412 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	PABPC1L2A	Q5JQF8	200 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	C6orf52	Q5T4I8	152 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	RGS7BP	Q6MZT1	257 aa	Predicted RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	IGFN1	Q86VF2	1251 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	ALDH16A1	Q8IZ83	802 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	PAQR4	Q8N4S7	273 aa	Predicted RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	RNF148	Q8N7C7	305 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM156A	Q8NDB6	213 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	CPEB3	Q8NE35	698 aa	Known RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	OR13C2	Q8NGS9	318 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF519	Q8TB69	540 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	SYNPR	Q8TBG9	265 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC7A13	Q8TCU3	470 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	NABP1	Q96AH0	204 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	C7orf34	Q96L11	122 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	CDRT15	Q96T59	188 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	BCL2L14	Q9BZR8	327 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	NDEL1	Q9GZM8	345 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	GORASP2	Q9H8Y8	452 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	ARL8B	Q9NVJ2	186 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	TMEM160	Q9NX00	188 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	MYEF2	Q9P2K5	600 aa	Known RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	EIF3K	Q9UBQ5	218 aa	Known RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	TAGLN3	Q9UI15	199 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	FZR1	Q9UM11	496 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	SAMD4A	Q9UPU9	718 aa	Known RBP	5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	TIMM10B	Q9Y5J6	103 aa		5.94	□□□□□ -1.46
SF3B3-209	ENST00000567635	LOC100509620	A0A075B734	347 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	IGHV4-61	A0A0C4DH41	118 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	LOC100289279	A0A1B0GTE1	492 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635		A0A1W2PPW3	197 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	C5orf49	A4QMS7	147 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	UNC119B	A6NIH7	251 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	C12orf71	A8MTZ7	269 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	LYNX1	G3V0Z9	82 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	XKRY	O14609	159 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	LMX1B	O60663	402 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	CLPTM1	O96005	669 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	TGFA	P01135	160 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	CD14	P08571	375 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	TACSTD2	P09758	323 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	LYNX1	P0DP58	116 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	HSD17B1	P14061	328 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF26	P17031	533 aa	Predicted RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF32	P17041	273 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	ITGA2	P17301	1181 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	TCN1	P20061	433 aa	Predicted RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	CCNO	P22674	350 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	CALB2	P22676	271 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	COL8A2	P25067	703 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	LAP3	P28838	519 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	GDI2	P50395	445 aa	Known RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	CHN2	P52757	468 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	KLF3	P57682	345 aa	Predicted RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	PSG4	Q00888	419 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	RIN1	Q13671	783 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	MAD2L1BP	Q15013	274 aa	Predicted RBP	5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms