RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 PSIP1O75475 530 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 UGT2B17O75795 530 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SLC22A5O76082 557 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 GABARAPO95166 117 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 PTBP3O95758 552 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 FTH1P02794 183 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 MT-ND2P03891 347 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 GNAO1P09471 354 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 HSMCR30P0CW71 290 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 KCNE1P15382 129 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 ZNF250P15622 560 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 ACKR3P25106 362 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 HLA-DMAP28067 261 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 ELK4P28324 431 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 GDI1P31150 447 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 RPL22P35268 128 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 SLC6A8P48029 635 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 PITPNBP48739 271 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 CCT3P49368 545 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 CASP4P49662 377 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 UGT2B15P54855 530 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 ARPP19P56211 112 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 ERVK-8P63133 956 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 TFAMQ00059 246 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 PRKCDQ05655 676 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 BTN1A1Q13410 526 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 DPYSL3Q14195 570 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 PDGFRLQ15198 375 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 IMPG1Q17R60 797 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 PARP15Q460N3 678 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 BCL7AQ4VC05 210 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 GPAT3Q53EU6 434 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 KLHL12Q53G59 568 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SPANXN4Q5MJ08 99 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SAMD4BQ5PRF9 694 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 TPRG1LQ5T0D9 272 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 HES5Q5TA89 166 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 N4BP2L1Q5TBK1 243 aaPredicted RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 TIGD3Q6B0B8 471 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 XAF1Q6GPH4 301 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 AFTPHQ6ULP2 937 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 STRADAQ7RTN6 431 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 TRMT11Q7Z4G4 463 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 SNX20Q7Z614 316 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 COMMD7Q86VX2 200 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 C10orf107Q8IVU9 208 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 CCDC36Q8IYA8 594 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 TCTE3Q8IZS6 198 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 C8orf59Q8N0T1 100 aaPredicted RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 SLC43A2Q8N370 569 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 STX19Q8N4C7 294 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 OR6M1Q8NGM8 313 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 C8orf46Q8TAG6 207 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 NDNFQ8TB73 568 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SPPL2BQ8TCT7 592 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 DYNC2LI1Q8TCX1 351 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 MAGEE2Q8TD90 523 aaPredicted RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 ITLN1Q8WWA0 313 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SLC7A6Q92536 515 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 MRPS31Q92665 395 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 FGF14Q92915 247 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 MYDGFQ969H8 173 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 TUBGCP3Q96CW5 907 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 RAB39BQ96DA2 213 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 YIPF6Q96EC8 236 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SGTBQ96EQ0 304 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 ARL5BQ96KC2 179 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 FOPNLQ96NB1 174 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SERPINB11Q96P15 392 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 C12orf57Q99622 126 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 GAL3ST1Q99999 423 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 ROGDIQ9GZN7 287 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 ILKAPQ9H0C8 392 aaPredicted RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 NIPAL2Q9H841 368 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 MRM3Q9HC36 420 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 MRPL47Q9HD33 250 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 SDHAF3Q9NRP4 125 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 HEBP1Q9NRV9 189 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 FBXL12Q9NXK8 326 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SCN3BQ9NY72 215 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 CNOT2Q9NZN8 540 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 NUFIP1Q9UHK0 495 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 FBXO5Q9UKT4 447 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 NDRG2Q9UN36 371 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 COPS3Q9UNS2 423 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 PDE10AQ9Y233 779 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 HES2Q9Y543 173 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 ETV7Q9Y603 341 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 COLEC10Q9Y6Z7 277 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 HSPE1-MOB4S4R3N1 261 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 CHD8Q9HCK8 2581 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 DCHS1Q96JQ0 3298 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 TRIP11Q15643 1979 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SDK1Q7Z5N4 2213 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 GPR179Q6PRD1 2367 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 A0A0U1RRA0 63 aa3.06□□□□□ -1.92
CHD9-212ENST00000564641 SMIM28A0A1B0GU29 152 aa3.06□□□□□ -1.92
CHD9-212ENST00000564641 TCRBV9S1A1TA0A576 114 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms