RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TGFBIQ15582 683 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 CHRNA6Q15825 494 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 KLHL40Q2TBA0 621 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 FBXO48Q5FWF7 155 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 SHISA6Q6ZSJ9 500 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 KRTAP13-1Q8IUC0 172 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 ACOT4Q8N9L9 421 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 DRAXINQ8NBI3 349 aaPredicted RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 MAGEE2Q8TD90 523 aaPredicted RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 NRGNQ92686 78 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 SLC38A4Q969I6 547 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 KIAA1143Q96AT1 154 aaPredicted RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 AURKBQ96GD4 344 aaPredicted RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 OXGR1Q96P68 337 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 OR2A5Q96R48 311 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 TGS1Q96RS0 853 aaKnown RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 FMO2Q99518 471 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 ECSITQ9BQ95 431 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 CENPKQ9BS16 269 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 ULBP2Q9BZM5 246 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 ANKRD19PQ9H560 264 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 XKR8Q9H6D3 395 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 RANBP3Q9H6Z4 567 aaPredicted RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 AHSPQ9NZD4 102 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 PSMC3IPQ9P2W1 217 aaPredicted RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 PEF1Q9UBV8 284 aaKnown RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 GGA2Q9UJY4 613 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 MN1Q10571 1320 aaPredicted RBP2.34□□□□□ -2.04
UBR1-205ENST00000564540 RPAP1Q9BWH6 1393 aaPredicted RBP2.34□□□□□ -2.04
UBR1-205ENST00000564540 TRAV40A0A0B4J280 105 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 C7orf66A4D0T2 115 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 GABRR3A8MPY1 467 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 TEX46H3BTG2 121 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 LSM1O15116 133 aaKnown RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 ATP5LO75964 103 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 H6PDO95479 791 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 OXSR1O95747 527 aaPredicted RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 AP2A1O95782 977 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 CSTAP01040 98 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 BGLAPP02818 100 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 CRYGCP07315 174 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 CSF3P09919 207 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 ZDHHC11BP0C7U3 371 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 RNASE2P10153 161 aaKnown RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 TNNI1P19237 187 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 OMGP23515 440 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 CHMLP26374 656 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 CD1CP29017 333 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 BMI1P35226 326 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 RDXP35241 583 aaKnown RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 GYG1P46976 350 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 HADHBP55084 474 aaKnown RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 RGS8P57771 180 aaPredicted RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 CDK16Q00536 496 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 IRF8Q02556 426 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 WDR43Q15061 677 aaKnown RBP eCLIP2.33□□□□□ -2.04
UBR1-205ENST00000564540 NKAIN1Q4KMZ8 207 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 DMRTC1Q5HYR2 192 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 COA6Q5JTJ3 125 aaKnown RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 C1orf220Q5T0J3 134 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 TMEM53Q6P2H8 277 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 ENPP6Q6UWR7 440 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 FAM92BQ6ZTR7 304 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 CENPQQ7L2Z9 268 aaPredicted RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 SCD5Q86SK9 330 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 CEP112Q8N8E3 955 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 OR4C5Q8NGB2 326 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 GLYATL2Q8WU03 294 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 FGF14Q92915 247 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 IFT74Q96LB3 600 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 PRRC1Q96M27 445 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 SIKE1Q9BRV8 207 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 ANKRD60Q9BZ19 345 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 RAB34Q9BZG1 259 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 IQCGQ9H095 443 aaKnown RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 STMN4Q9H169 189 aaPredicted RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 HAUS4Q9H6D7 363 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 TDRD3Q9H7E2 651 aaKnown RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 NMRAL1Q9HBL8 299 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 NT5MQ9NPB1 228 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 CALYQ9NYX4 217 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 PTTG3PQ9NZH4 202 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 XCL2Q9UBD3 114 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 PITPNC1Q9UKF7 332 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 IKZF2Q9UKS7 526 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 MMP17Q9ULZ9 603 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 STARD10Q9Y365 291 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 PEX16Q9Y5Y5 336 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 COMMD3-BMI1R4GMX3 469 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 KIF27Q86VH2 1401 aa2.33□□□□□ -2.04
UBR1-205ENST00000564540 COL27A1Q8IZC6 1860 aaPredicted RBP2.33□□□□□ -2.04
UBR1-205ENST00000564540 A0A1W2PP18 115 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 TCRBV9S1A1TA0A576 114 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 EIF3HO15372 352 aaKnown RBP eCLIP2.32□□□□□ -2.04
UBR1-205ENST00000564540 OR2F2O95006 317 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 RCBTB2O95199 551 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 TMEM50AO95807 157 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 ADRA2AP08913 450 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 MCF2P10911 925 aa2.32□□□□□ -2.04
UBR1-205ENST00000564540 SRMP19623 302 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms