RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 STOMP27105 288 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 HTR2AP28223 471 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 APLNRP35414 380 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 CHI3L1P36222 383 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 TGFBR2P37173 567 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 CDKN2CP42773 168 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 PITPNBP48739 271 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 BIDP55957 195 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 PPP1CBP62140 327 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 COX10Q12887 443 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 HIST3H3Q16695 136 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 CCDC153Q494R4 210 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 SLC36A2Q495M3 483 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 TTMPQ5BVD1 217 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 ZMAT1Q5H9K5 638 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 PABPC1L2AQ5JQF8 200 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 LYPD2Q6UXB3 125 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 SLC16A14Q7RTX9 510 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF572Q7Z3I7 529 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 LRRC34Q8IZ02 419 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 GALNT4Q8N4A0 578 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 LSMEM1Q8N8F7 131 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 OR8B3Q8NGG8 313 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 OR6X1Q8NH79 312 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF420Q8TAQ5 688 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 SLC35B4Q969S0 331 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 PLEKHA8Q96JA3 519 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 OR8B2Q96RD0 313 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 SPATA9Q9BWV2 254 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 SLC19A3Q9BZV2 496 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 TRIM15Q9C019 465 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 MMP28Q9H239 520 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 LRMDAQ9H2I8 198 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 POFUT1Q9H488 388 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNRD1Q9P1U0 126 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 IL19Q9UHD0 177 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 VPREB3Q9UKI3 123 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 PPP1R3CQ9UQK1 317 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 USH1CQ9Y6N9 552 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 DNAH7Q8WXX0 4024 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 CSMD3Q7Z407 3707 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 A0A1B0GWA3 101 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 C5orf49A4QMS7 147 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 RNASEK-C17orf49H0YIS7 233 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 C3orf84H3BNL1 204 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 PHYHO14832 338 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 ENSAO43768 121 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 ENTPD5O75356 428 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 FCN3O75636 299 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 TOX4O94842 621 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 FARS2O95363 451 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 PGA4P0DJD7 388 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 PGA3P0DJD8 388 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 PSMB10P40306 273 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF133P52736 654 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 TXNL4AP83876 142 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 EMX2Q04743 252 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 PLP2Q04941 152 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 RPS26P11Q5JNZ5 115 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 SPANXN4Q5MJ08 99 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 FAM201AQ5SY85 155 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 COMTD1Q86VU5 262 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 LYG1Q8N1E2 194 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 LRRC18Q8N456 261 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 WFDC9Q8NEX5 89 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 OR2Z1Q8NG97 314 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 VANGL1Q8TAA9 524 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 AGR3Q8TD06 166 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 LRTOMTQ8WZ04 291 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 LHX4Q969G2 390 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 NABP1Q96AH0 204 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 TESCQ96BS2 214 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 TUBGCP3Q96CW5 907 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 TEX37Q96LM6 180 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 CCDC115Q96NT0 180 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 WDFY2Q96P53 400 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 OR2V2Q96R30 315 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF607Q96SK3 696 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 FMO2Q99518 471 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 SEPHS2Q99611 448 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 DPAGT1Q9H3H5 408 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 CLN8Q9UBY8 286 aa6.36□□□□□ -1.39
HERPUD1-206ENST00000563343 CCDC154A6NI56 674 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 C11orf98E9PRG8 122 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 IFNL4K9M1U5 179 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 TIMM8AO60220 97 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 TRIM13O60858 407 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 SERPINI2O75830 405 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 BCHEP06276 602 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 QDPRP09417 244 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 IGLL1P15814 213 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF32P17041 273 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 KITLGP21583 273 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 EPHA3P29320 983 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 PMELP40967 661 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 KIR2DS4P43632 304 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 PSG4Q00888 419 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 CD69Q07108 199 aa6.35□□□□□ -1.39
HERPUD1-206ENST00000563343 POU4F2Q12837 409 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms