RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 UBCP0CG48 685 aaKnown RBP6.86□□□□□ -1.31
TCF4-216ENST00000562680 SLC2A5P22732 501 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 UGT2B10P36537 528 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 CCR9P51686 369 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 ACTBP60709 375 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 ACTG1P63261 375 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 BAK1Q16611 211 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 TMEM69Q5SWH9 247 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 RTL6Q6ICC9 239 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 SLC25A25Q6KCM7 469 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 GALNTL5Q7Z4T8 443 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 CREB3L1Q96BA8 519 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 TEAD3Q99594 435 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 PRR14Q9BWN1 585 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 FGF20Q9NP95 211 aaPredicted RBP6.86□□□□□ -1.31
TCF4-216ENST00000562680 MGAT4AQ9UM21 535 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 FAM171A2A8MVW0 826 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 K7ESF4 209 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 ZNF593O00488 134 aaPredicted RBP6.86□□□□□ -1.31
TCF4-216ENST00000562680 SEC14L2O76054 403 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 GABARAPO95166 117 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 CRYABP02511 175 aaKnown RBP6.86□□□□□ -1.31
TCF4-216ENST00000562680 RPL18Q07020 188 aaKnown RBP6.86□□□□□ -1.31
TCF4-216ENST00000562680 TUSC1Q2TAM9 212 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 ACER2Q5QJU3 275 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 C12orf73Q69YU5 71 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 POGLUT1Q8NBL1 392 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 GUCD1Q96NT3 240 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 NEDD4LQ96PU5 975 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 OCIAD1Q9NX40 245 aa6.86□□□□□ -1.31
TCF4-216ENST00000562680 TRDV1A0A1B0GX56 115 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 PMS2P1A4D2B8 440 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ZNF814B7Z6K7 855 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 L7N2F9 121 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 CT62P0C5K7 136 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 TRAPPC2P0DI81 140 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 TRAPPC2BP0DI82 140 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 HTR2AP28223 471 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SLC37A1P57057 533 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 PSG6Q00889 435 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 MADCAM1Q13477 382 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 YIF1BQ5BJH7 314 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 METAP1DQ6UB28 335 aaPredicted RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 USP51Q70EK9 711 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 GLB1L2Q8IW92 636 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 OR4C3Q8NH37 302 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 CT55Q8WUE5 264 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 BEX2Q9BXY8 128 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 MMP25Q9NPA2 562 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 HINT3Q9NQE9 182 aaKnown RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 NTMQ9P121 344 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 NUP214P35658 2090 aaPredicted RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 ZNF780AO75290 641 aaPredicted RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 RP2O75695 350 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ZNF35P13682 527 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SRD5A2P31213 254 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 MTNR1BP49286 362 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 GZMMP51124 257 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 TOMM34Q15785 309 aaPredicted RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 ACKR1Q16570 336 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ARTNQ5T4W7 220 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 EIF5AL1Q6IS14 154 aaKnown RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 NLRC3Q7RTR2 1065 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 APH1AQ96BI3 265 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ACTR6Q9GZN1 396 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 RPH3ALQ9UNE2 315 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 TMEM72A0PK05 275 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SOCS6O14544 535 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 CLEC2LP0C7M8 214 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 PCSK6P29122 969 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ADH7P40394 386 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SLC25A1P53007 311 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 IGLV3-21P80748 117 aaPredicted RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 RHEBQ15382 184 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ZNF74Q16587 644 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 PRAMEF17Q5VTA0 474 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 CPNE4Q96A23 557 aaPredicted RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 TMIGD2Q96BF3 282 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SLC52A3Q9NQ40 469 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 MEMO1Q9Y316 297 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 A0A0X1KG70 313 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 BTBD17A6NE02 478 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 G3V3Y1 287 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 RAD51DO75771 328 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SOX3P41225 446 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 FOXF1Q12946 379 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 CAMK2DQ13557 499 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 Q499Y3 187 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 STPG1Q5TH74 334 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ACSM5Q6NUN0 579 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ESPNLQ6ZVH7 1005 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SSX7Q7RTT5 188 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 NANOGP1Q8N7R0 232 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 OR4N2Q8NGD1 307 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 OR2V1Q8NHB1 315 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 THAP6Q8TBB0 222 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 RAB40AQ8WXH6 277 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms