RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SLC17A7Q9P2U7 560 aa4.35□□□□□ -1.71
HERC1-213ENST00000561359 PYCARDQ9ULZ3 195 aa4.35□□□□□ -1.71
HERC1-213ENST00000561359 TMCO1Q9UM00 188 aa4.35□□□□□ -1.71
HERC1-213ENST00000561359 OAZ3Q9UMX2 235 aa4.35□□□□□ -1.71
HERC1-213ENST00000561359 PPP1R3CQ9UQK1 317 aa4.35□□□□□ -1.71
HERC1-213ENST00000561359 CAB39Q9Y376 341 aaPredicted RBP4.35□□□□□ -1.71
HERC1-213ENST00000561359 FAM159BA6NKW6 160 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 TMEM178BH3BS89 294 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 AP3D1O14617 1153 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 PHYHO14832 338 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 AKAP8O43823 692 aaKnown RBP4.34□□□□□ -1.71
HERC1-213ENST00000561359 PEX14O75381 377 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 UGT2B17O75795 530 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 MFN2O95140 757 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 PAHP00439 452 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 OPN1SWP03999 348 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 CD55P08174 381 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 ADH4P08319 380 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 RBP1P09455 135 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 CCDC159P0C7I6 412 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 MMP9P14780 707 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 CCNOP22674 350 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 SLC6A2P23975 617 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 HSD17B3P37058 310 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 MPV17P39210 176 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 CCT3P49368 545 aaKnown RBP4.34□□□□□ -1.71
HERC1-213ENST00000561359 BNIP2Q12982 314 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 CHI3L2Q15782 390 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 MAPK14Q16539 360 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 RUNDC3AQ59EK9 446 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 TCTEX1D4Q5JR98 221 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 PHYHD1Q5SRE7 291 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 WDR25Q64LD2 544 aaPredicted RBP4.34□□□□□ -1.71
HERC1-213ENST00000561359 GPRIN3Q6ZVF9 776 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 C16orf62Q7Z3J2 963 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 KRT77Q7Z794 578 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 COMTD1Q86VU5 262 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 SNX32Q86XE0 403 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 CALHM3Q86XJ0 350 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 MIER2Q8N344 545 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 C17orf53Q8N3J3 647 aaPredicted RBP4.34□□□□□ -1.71
HERC1-213ENST00000561359 DRAXINQ8NBI3 349 aaPredicted RBP4.34□□□□□ -1.71
HERC1-213ENST00000561359 FAM71CQ8NEG0 241 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 OR56A1Q8NGH5 318 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 OR5D16Q8NGK9 328 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 OR1J2Q8NGS2 313 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 FGFBP3Q8TAT2 258 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 FAM76AQ8TAV0 307 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 SLC25A36Q96CQ1 311 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 SAMD8Q96LT4 415 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 WDFY2Q96P53 400 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 TECTBQ96PL2 329 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 OR2M2Q96R28 347 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 OR7D2Q96RA2 312 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 SIGLEC11Q96RL6 698 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 FOXB1Q99853 325 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 BAG1Q99933 345 aaPredicted RBP4.34□□□□□ -1.71
HERC1-213ENST00000561359 ULBP2Q9BZM5 246 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 A4GALTQ9NPC4 353 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 ARGLU1Q9NWB6 273 aaPredicted RBP4.34□□□□□ -1.71
HERC1-213ENST00000561359 CHCHD3Q9NX63 227 aaKnown RBP4.34□□□□□ -1.71
HERC1-213ENST00000561359 ZNRD1Q9P1U0 126 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 TIMM22Q9Y584 194 aa4.34□□□□□ -1.71
HERC1-213ENST00000561359 HUWE1Q7Z6Z7 4374 aaKnown RBP4.34□□□□□ -1.71
HERC1-213ENST00000561359 IQCMA0A1B0GVH7 501 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 TCRBV9S1A1TA0A576 114 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 CLDN24A6NM45 220 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 A8MVM7 634 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 TIMM8AO60220 97 aaPredicted RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 SUPT7LO94864 414 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 SNAP29O95721 258 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 CLIC3O95833 236 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 AK1P00568 194 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 PTHP01270 115 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 LIPFP07098 398 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 PNMTP11086 282 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 UQCRBP14927 111 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 FRKP42685 505 aaPredicted RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 RPS6KA3P51812 740 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 ARF6P62330 175 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 KCNJ10P78508 379 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 GUCY2DQ02846 1103 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 LY6EQ16553 131 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 TM4SF20Q53R12 229 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 HSP90B2PQ58FF3 399 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 TMEM255AQ5JRV8 349 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 C1orf140Q5VVS0 124 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 TMEM53Q6P2H8 277 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 UNQ9370/PRO34162Q6UXP9 181 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 C3orf62Q6ZUJ4 267 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 ZNF627Q7L945 461 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 HMGN2P46Q86SG4 172 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 VRK2Q86Y07 508 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 SKA3Q8IX90 412 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 C20orf196Q8IYI0 205 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 TMEM123Q8N131 208 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 SCAIQ8N9R8 606 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 PNLDC1Q8NA58 520 aaKnown RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 VPS37AQ8NEZ2 397 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 OR2Z1Q8NG97 314 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms