RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RAB3DO95716 219 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 RAB36O95755 333 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 C6orf47O95873 294 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 CD3GP09693 182 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF35P13682 527 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 AKR1C2P52895 323 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 ADPRHP54922 357 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 RPL38P63173 70 aaKnown RBP6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 AKR1C1Q04828 323 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 CACNG1Q06432 222 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 UBE2V1Q13404 147 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 MRPL23Q16540 153 aaKnown RBP6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 DECR1Q16698 335 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 OR52W1Q6IF63 320 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 SLC39A5Q6ZMH5 540 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 SSX6Q7RTT6 188 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 ARIH2OSQ8N7S6 290 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 PNPLA1Q8N8W4 532 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 OR9Q2Q8NGE9 314 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 CD300LFQ8TDQ1 290 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 SAP25Q8TEE9 199 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 MS4A10Q96PG2 267 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 FCRL5Q96RD9 977 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 STRADBQ9C0K7 418 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 C2orf42Q9NWW7 574 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 OPN4Q9UHM6 478 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 ERRFI1Q9UJM3 462 aaPredicted RBP6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 TMEM72A0PK05 275 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 TSTD3H0UI37 97 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 MT-ND4LP03901 98 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 OPN1LWP04000 364 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 WNT1P04628 370 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 CD2P06729 351 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 IDSP22304 550 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 BDKRB2P30411 391 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 CHI3L1P36222 383 aaPredicted RBP6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 MMP15P51511 669 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 CDH12P55289 794 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 TNFRSF9Q07011 255 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 HSPB3Q12988 150 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 NAE1Q13564 534 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 KLF9Q13886 244 aaPredicted RBP6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 IDNKQ5T6J7 187 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 B3GLCTQ6Y288 498 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF841Q6ZN19 808 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 MDGA2Q7Z553 956 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 PTOV1Q86YD1 416 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 MARCH9Q86YJ5 346 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 SYT12Q8IV01 421 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 OR6V1Q8N148 313 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 NPWQ8N729 165 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 OR52I1Q8NGK6 324 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 OR1S2Q8NGQ3 325 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 EGFL8Q99944 293 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 TPSD1Q9BZJ3 242 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 SERGEFQ9UGK8 458 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 FLVCR2Q9UPI3 526 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 MMACHCQ9Y4U1 282 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 TMEM129A0AVI4 362 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 M0QZ24 198 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 M0QZ92 97 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 MBTPS2O43462 519 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 CREBL2O60519 120 aaPredicted RBP6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 NFATC1O95644 943 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 HLA-DPB1P04440 258 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 ETFAP13804 333 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 NDUFS1P28331 727 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 RGS19P49795 217 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 CD81P60033 236 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 MRPS6P82932 125 aaKnown RBP6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 BIKQ13323 160 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 VEZF1Q14119 521 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 ABRAXAS2Q15018 415 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 OR8G1Q15617 311 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 PNLIPRP3Q17RR3 467 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 HNRNPA1L2Q32P51 320 aaKnown RBP6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 CARD17Q5XLA6 110 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF626Q68DY1 528 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 HBMQ6B0K9 141 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 FAM98AQ8NCA5 519 aaKnown RBP6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 OR52B6Q8NGF0 335 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 OR5T3Q8NGG3 340 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 OR9A2Q8NGT5 310 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 PHYHIPLQ96FC7 376 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF479Q96JC4 524 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 TEAD3Q99594 435 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 ATG101Q9BSB4 218 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 PCGF1Q9BSM1 259 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 DOHHQ9BU89 302 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 DERL2Q9GZP9 239 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 WDR76Q9H967 626 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 CTPS2Q9NRF8 586 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 ASIC5Q9NY37 505 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 OR12D3Q9UGF7 316 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 ICKQ9UPZ9 632 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 KCNIP3Q9Y2W7 256 aa6.06□□□□□ -1.44
TSPAN3-209ENST00000560715 SNRPGP15A8MWD9 76 aa6.05□□□□□ -1.44
TSPAN3-209ENST00000560715 FLRT2O43155 660 aa6.05□□□□□ -1.44
TSPAN3-209ENST00000560715 CRYGCP07315 174 aa6.05□□□□□ -1.44
TSPAN3-209ENST00000560715 GKN3PP0CG01 181 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms