RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SAP30LQ9HAJ7 183 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 DCAF16Q9NXF7 216 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 UBAP1Q9NZ09 502 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 AURKCQ9UQB9 309 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 IGKV1D-42A0A075B6H8 117 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 ISPDA4D126 451 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 VGLL3A8MV65 326 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 FAM220BPB1ANY3 271 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 M0QZ24 198 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 GMNNO75496 209 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 CPSF4O95639 269 aaKnown RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 KNG1P01042 644 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 IGHMP01871 453 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 CCL2P13500 99 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 ZNF12P17014 697 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 HOXB9P17482 250 aaPredicted RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 GRPRP30550 384 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 PCGF2P35227 344 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 CHI3L1P36222 383 aaPredicted RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 SEC61A1P61619 476 aaKnown RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 TEKQ02763 1124 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 C1DQ13901 141 aaKnown RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 GNA13Q14344 377 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 ATP6AP1Q15904 470 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 TSTQ16762 297 aaKnown RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 CYP51A1Q16850 503 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 HFEQ30201 348 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 LIN52Q52LA3 116 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 INTS11Q5TA45 600 aaKnown RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 RNF220Q5VTB9 566 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 BRICD5Q6PL45 260 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 NHLRC1Q6VVB1 395 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 AMIGO2Q86SJ2 522 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 SERPINA11Q86U17 422 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 CLIP4Q8N3C7 705 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 GALNT4Q8N4A0 578 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 OR2T12Q8NG77 320 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 SYNPRQ8TBG9 265 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 SNX33Q8WV41 574 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 RAB1CQ92928 201 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 TAAR8Q969N4 342 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 TIMD4Q96H15 378 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 ZNF583Q96ND8 569 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 FOXB1Q99853 325 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 RBM4BQ9BQ04 359 aaKnown RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 SEMA6AQ9H2E6 1030 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 MTHFD2LQ9H903 347 aaPredicted RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 C8orf4Q9NR00 106 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 SLC25A37Q9NYZ2 338 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 VAPAQ9P0L0 249 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 ZNF443Q9Y2A4 671 aaPredicted RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 POLR3KQ9Y2Y1 108 aaPredicted RBP8.37□□□□□ -1.07
TPM1-225ENST00000560679 AUP1Q9Y679 476 aa8.37□□□□□ -1.07
TPM1-225ENST00000560679 IGHV3OR16-10A0A075B7F0 116 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 LOC102725191A0A1B0GVB3 256 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 FAM181BA6NEQ2 426 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 SAC3D1A6NKF1 404 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 GSTA4O15217 222 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 AKAP8O43823 692 aaKnown RBP8.36□□□□□ -1.07
TPM1-225ENST00000560679 FOXH1O75593 365 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 UBL3O95164 117 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 TSPAN15O95858 294 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 GPANK1O95872 356 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 SERPINA5P05154 406 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 OR8G3PP0DMU2 310 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 GTF2E2P29084 291 aaKnown RBP8.36□□□□□ -1.07
TPM1-225ENST00000560679 CDKN2CP42773 168 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 RAG2P55895 527 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 COPZ1P61923 177 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 HOXC5Q00444 222 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 GTDC1Q4AE62 458 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 SPRNQ5BIV9 151 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 GLYATQ6IB77 296 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 ASPHD2Q6ICH7 369 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 C16orf87Q6PH81 154 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 C17orf107Q6ZR85 190 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 C9orf139Q6ZV77 190 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 CALHM3Q86XJ0 350 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 SKA3Q8IX90 412 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 MICU2Q8IYU8 434 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 PARP8Q8N3A8 854 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 ADPRHL1Q8NDY3 354 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 SLC30A7Q8NEW0 376 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 PNPT1Q8TCS8 783 aaKnown RBP8.36□□□□□ -1.07
TPM1-225ENST00000560679 ST7LQ8TDW4 575 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 CCL17Q92583 94 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 ELMOD3Q96FG2 381 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 CENPNQ96H22 339 aaPredicted RBP8.36□□□□□ -1.07
TPM1-225ENST00000560679 TXNDC15Q96J42 360 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 LRR1Q96L50 414 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 CIB1Q99828 191 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 C9orf16Q9BUW7 83 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 ULBP2Q9BZM5 246 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 YY1AP1Q9H869 796 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 POFUT2Q9Y2G5 429 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 INSIG2Q9Y5U4 225 aa8.36□□□□□ -1.07
TPM1-225ENST00000560679 ELOVL7A1L3X0 281 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 DPPA5A6NC42 116 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 ZSCAN5BA6NJL1 495 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 A8MXK9 166 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms