RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ERMAPQ96PL5 475 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 SORCS2Q96PQ0 1159 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 SYT3Q9BQG1 590 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 TRIM15Q9C019 465 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 RAB1BQ9H0U4 201 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 NRIP3Q9NQ35 241 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 FBXO9Q9UK97 447 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 A0A1W2PPW3 197 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 SLC22A23A1A5C7 686 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 C5orf49A4QMS7 147 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 C12orf71A8MTZ7 269 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 SLC16A7O60669 478 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 PPP1R3DO95685 299 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 TP53P04637 393 aaPredicted RBP11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 MSR1P21757 451 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 FPR3P25089 353 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 STOMP27105 288 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 SLC6A6P31641 620 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 GLRXP35754 106 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 SELENOVP59797 346 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 MS4A2Q01362 244 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 PPP1R8Q12972 351 aaKnown RBP11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 DNAL1Q4LDG9 190 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 FAM27BQ5VT28 67 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 RGS7BPQ6MZT1 257 aaPredicted RBP11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 FAM122BQ7Z309 247 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 ADCK1Q86TW2 530 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 ZCCHC24Q8N2G6 241 aaKnown RBP11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 AKR7LQ8NHP1 331 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 POP5Q969H6 163 aaKnown RBP11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 GPA33Q99795 319 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 FUZQ9BT04 418 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 IFT27Q9BW83 186 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 MRPL37Q9BZE1 423 aaKnown RBP11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 SYT4Q9H2B2 425 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR52D1Q9H346 318 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 MAGIXQ9H6Y5 334 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 EMC7Q9NPA0 242 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 U3KQV3 271 aa11.19□□□□□ -0.62
CTDSPL2-209ENST00000560620 IGHV4-30-2A0A087WSY4 118 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 TCRBV5S2A0A599 114 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 AHCYL1O43865 530 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 CCNB2O95067 398 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 HEXAP06865 529 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 ADRA2AP08913 450 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 CST2P09228 141 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 MMP7P09237 267 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 CSF3P09919 207 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 RAD52P43351 418 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 PPOXP50336 477 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 GDI2P50395 445 aaKnown RBP11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 FXYD6P3P58550 94 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 RFX4Q33E94 735 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 PAQR4Q8N4S7 273 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 LINC00471Q8N535 108 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 CPEB3Q8NE35 698 aaKnown RBP11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR9Q2Q8NGE9 314 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR52L1Q8NGH7 329 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 MRPL24Q96A35 216 aaKnown RBP11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 SAMD8Q96LT4 415 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 GPX7Q96SL4 187 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 ZNF416Q9BWM5 594 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 TPK1Q9H3S4 243 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 REEP1Q9H902 201 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 POLE4Q9NR33 117 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 EIF3KQ9UBQ5 218 aaKnown RBP11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 POLR1DQ9Y2S0 133 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 TIMM10BQ9Y5J6 103 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 LYVE1Q9Y5Y7 322 aa11.18□□□□□ -0.62
CTDSPL2-209ENST00000560620 ARFGEF3Q5TH69 2177 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 M0R233 179 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 GNGT2O14610 69 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 SYNGR3O43761 229 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 KHDRBS3O75525 346 aaKnown RBP11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 RENP00797 406 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 CTLA4P16410 223 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 PDLIM4P50479 330 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 UCP2P55851 309 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 PSG4Q00888 419 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 TSPAN31Q12999 210 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 NKPD1Q17RQ9 610 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 ALKBH6Q3KRA9 238 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 CLEC12AQ5QGZ9 265 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR2T5Q6IEZ7 315 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 ZNF774Q6NX45 483 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 C1orf94Q6P1W5 598 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 PGBD2Q6P3X8 592 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 LEG1Q6P5S2 330 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 DNM1P34Q6PK57 102 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 UNQ6126/PRO20091Q6UXV3 157 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 PTCHD4Q6ZW05 846 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 LRP11Q86VZ4 500 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 SPATA24Q86W54 205 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 GLB1L2Q8IW92 636 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR1J1Q8NGS3 322 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 OR2T29Q8NH02 315 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 C11orf40Q8WZ69 217 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 DOK1Q99704 481 aa11.17□□□□□ -0.62
CTDSPL2-209ENST00000560620 PIMREGQ9BSJ6 248 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms