RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DNAJC15Q9Y5T4 150 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 SNX11Q9Y5W9 270 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 ST8SIA5O15466 376 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 ITGB7P26010 798 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 MRPL2Q5T653 305 aaKnown RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 RANBP10Q6VN20 620 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 LHX4Q969G2 390 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 CPPED1Q9BRF8 314 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 EIF1BO60739 113 aaKnown RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 PAX5Q02548 391 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 RPL3LQ92901 407 aaKnown RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 RTP4Q96DX8 246 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 ING1Q9UK53 422 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 A0A1W2PPQ1 181 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 I6L893 689 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 PCBP4P57723 403 aaKnown RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 HLXQ14774 488 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 AGBL4Q5VU57 503 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 ASB13Q8WXK3 278 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC39A13Q96H72 371 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR4C12Q96R67 309 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 NPAS1Q99742 590 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 LRIT1Q9P2V4 623 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 GPR55Q9Y2T6 319 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 A6NDN8 102 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 HTR1FP30939 366 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 CLDN12P56749 244 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 LHFPL2Q6ZUX7 228 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 GHSRQ92847 366 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 MRPS24Q96EL2 167 aaKnown RBP12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 ATP5SQ99766 215 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 OCEL1Q9H607 264 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 A0A0U1RQF3 1178 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 M0QZK8 103 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 GGCTO75223 188 aaKnown RBP12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 OPN1LWP04000 364 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZP2Q05996 745 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 INPP5JQ15735 1006 aaPredicted RBP12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 CDCA2Q69YH5 1023 aaPredicted RBP12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF761Q86XN6 746 aaPredicted RBP12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR5D18Q8NGL1 313 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 MED20Q9H944 212 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 PSENENQ9NZ42 101 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 SHROOM3Q8TF72 1996 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 P2RY10O00398 339 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 FRS3O43559 492 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 HNRNPA1P09651 372 aaKnown RBP eCLIP12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 PSAPL1Q6NUJ1 521 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF343Q6P1L6 599 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF595Q8IYB9 648 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 PQLC3Q8N755 202 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 PRSS3P2Q8NHM4 247 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 DUSP13Q9UII6 198 aa12.77□□□□□ -0.36
CSPG4P12-202ENST00000559989 TPBGQ13641 420 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC35D3Q5M8T2 416 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 MANEAQ5SRI9 462 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 GGNBP1Q5YKI7 109 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 MBOAT2Q6ZWT7 520 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR5D13Q8NGL4 314 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 TMEM106AQ96A25 262 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 PLEKHA2Q9HB19 425 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 H0YIV9 168 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 FABP4P15090 132 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 ARSDP51689 593 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 RPS23P62266 143 aaKnown RBP12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 STUMQ69YW2 141 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 VASH2Q86V25 355 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 GJC3Q8NFK1 279 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR51H1Q8NH63 302 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 WDR83Q9BRX9 315 aaKnown RBP12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 ARID1BQ8NFD5 2236 aaPredicted RBP12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 F5H697 171 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 CCR9P51686 369 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 RPS16P62249 146 aaKnown RBP12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 DHODHQ02127 395 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 C17orf67Q0P5P2 114 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 C18orf21Q32NC0 220 aaPredicted RBP12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 DPY19L2P2Q6ZN68 376 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC22A12Q96S37 553 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 LRFN3Q9BTN0 628 aa12.77□□□□□ -0.37
CSPG4P12-202ENST00000559989 SIAH2O43255 324 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 CHRM2P08172 466 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 TMEM176BQ3YBM2 270 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR5M10Q6IEU7 315 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF687Q8N1G0 1237 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR6M1Q8NGM8 313 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 RHBDD1Q8TEB9 315 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF583Q96ND8 569 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 MAP1LC3CQ9BXW4 147 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 ATP6V1FQ16864 119 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF768Q9H5H4 540 aaKnown RBP12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 FLVCR1Q9Y5Y0 555 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 PRAMEF26H0Y7S4 382 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 NEURL1O76050 574 aa12.76□□□□□ -0.37
CSPG4P12-202ENST00000559989 C1QBP02746 253 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms