RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 RP9Q8TA86 221 aaKnown RBP10.77□□□□□ -0.69
SNX1-209ENST00000559961 ZNF418Q8TF45 676 aaPredicted RBP10.77□□□□□ -0.69
SNX1-209ENST00000559961 ELMOD3Q96FG2 381 aa10.77□□□□□ -0.69
SNX1-209ENST00000559961 FAHD2AQ96GK7 314 aa10.77□□□□□ -0.69
SNX1-209ENST00000559961 C1orf159Q96HA4 380 aa10.77□□□□□ -0.69
SNX1-209ENST00000559961 HOPXQ9BPY8 73 aaPredicted RBP10.77□□□□□ -0.69
SNX1-209ENST00000559961 SAP30LQ9HAJ7 183 aa10.77□□□□□ -0.69
SNX1-209ENST00000559961 LPAR2Q9HBW0 351 aa10.77□□□□□ -0.69
SNX1-209ENST00000559961 KRCC1Q9NPI7 259 aaPredicted RBP10.77□□□□□ -0.69
SNX1-209ENST00000559961 C20orf141Q9NUB4 165 aa10.77□□□□□ -0.69
SNX1-209ENST00000559961 MYEF2Q9P2K5 600 aaKnown RBP10.77□□□□□ -0.69
SNX1-209ENST00000559961 GRHPRQ9UBQ7 328 aa10.77□□□□□ -0.69
SNX1-209ENST00000559961 CGGBP1Q9UFW8 167 aaPredicted RBP10.77□□□□□ -0.69
SNX1-209ENST00000559961 FAM32AQ9Y421 112 aaKnown RBP10.77□□□□□ -0.69
SNX1-209ENST00000559961 A0A0A6YYJ9 748 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 IGHV3-13P01766 116 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 CST2P09228 141 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 GAAP10253 952 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 H2AFXP16104 143 aaPredicted RBP10.76□□□□□ -0.69
SNX1-209ENST00000559961 ZNF32P17041 273 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 GSTM3P21266 225 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 TNFSF4P23510 183 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 CDAP32320 146 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 CRYBB2P43320 205 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 MAGEB1P43366 347 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 MVKQ03426 396 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 RUNX1T1Q06455 604 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 IFI44LQ53G44 452 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 ARMC4Q5T2S8 1044 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 FAM27BQ5VT28 67 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 OR51A7Q8NH64 312 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 GEMIN6Q8WXD5 167 aaKnown RBP10.76□□□□□ -0.69
SNX1-209ENST00000559961 LRRC37BQ96QE4 947 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 DIRC2Q96SL1 478 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 SOX7Q9BT81 388 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 WACQ9BTA9 647 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 METTL17Q9H7H0 456 aaPredicted RBP10.76□□□□□ -0.69
SNX1-209ENST00000559961 EFCAB1Q9HAE3 211 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 NDRG4Q9ULP0 352 aaKnown RBP10.76□□□□□ -0.69
SNX1-209ENST00000559961 HIF3AQ9Y2N7 669 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 DNHD1Q96M86 4753 aa10.76□□□□□ -0.69
SNX1-209ENST00000559961 RTTNQ86VV8 2226 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 IGLV3-9A0A075B6K5 115 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 CXCR6O00574 342 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 SPRY3O43610 288 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 MSR1P21757 451 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 TUBG1P23258 451 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 LAP3P28838 519 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 YAP1P46937 504 aaKnown RBP10.75□□□□□ -0.69
SNX1-209ENST00000559961 ZNF133P52736 654 aaPredicted RBP10.75□□□□□ -0.69
SNX1-209ENST00000559961 ERVK-25P63136 954 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 GLO1Q04760 184 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 KRT72Q14CN4 511 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 MSMPQ1L6U9 139 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 USP51Q70EK9 711 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 TSPYL5Q86VY4 417 aaPredicted RBP10.75□□□□□ -0.69
SNX1-209ENST00000559961 NRMQ8IXM6 262 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 PAQR4Q8N4S7 273 aaPredicted RBP10.75□□□□□ -0.69
SNX1-209ENST00000559961 AKR7LQ8NHP1 331 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 ABHD4Q8TB40 342 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 ST7LQ8TDW4 575 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 CCL17Q92583 94 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 HDAC2Q92769 488 aaKnown RBP10.75□□□□□ -0.69
SNX1-209ENST00000559961 YIPF5Q969M3 257 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 FAM162AQ96A26 154 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 RCN3Q96D15 328 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 COG8Q96MW5 612 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 JMJD8Q96S16 334 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 SEPHS2Q99611 448 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 TUBG2Q9NRH3 451 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 ZDHHC8Q9ULC8 765 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 TMEM5Q9Y2B1 443 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 ATRQ13535 2644 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 ARFGEF3Q5TH69 2177 aa10.75□□□□□ -0.69
SNX1-209ENST00000559961 A0A0G2JMP0 313 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 A0A0X1KG70 313 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 ISPDA4D126 451 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 H3BSA7 217 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 FXYD1O00168 92 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 AHCYL1O43865 530 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 TIMM8AO60220 97 aaPredicted RBP10.74□□□□□ -0.69
SNX1-209ENST00000559961 PNPP00491 289 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 IGFBP1P08833 259 aaPredicted RBP10.74□□□□□ -0.69
SNX1-209ENST00000559961 MMP7P09237 267 aaPredicted RBP10.74□□□□□ -0.69
SNX1-209ENST00000559961 CRYBA2P53672 197 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 ERVS71-1P61550 626 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 PPP1CBP62140 327 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 PSG4Q00888 419 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 LIPEQ05469 1076 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 PRKCDQ05655 676 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 FMODQ06828 376 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 SCRN3Q0VDG4 424 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 SPATA46Q5T0L3 261 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 AVPI1Q5T686 147 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 SLC25A47Q6Q0C1 308 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 C12orf54Q6X4T0 127 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 SYT9Q86SS6 491 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 OFCC1Q8IZS5 231 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 OR4M2Q8NGB6 313 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 ACOT11Q8WXI4 607 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms