RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DOK1Q99704 481 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 EMC7Q9NPA0 242 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 YAE1D1Q9NRH1 226 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 ACTR3BQ9P1U1 418 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 SIGLEC7Q9Y286 467 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 POLR1DQ9Y2S0 133 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 IER3IP1Q9Y5U9 82 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 TMEM129A0AVI4 362 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 PRSS37A4D1T9 235 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 C5orf49A4QMS7 147 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 MGRN1O60291 552 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 SLC16A7O60669 478 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 PPP1R3DO95685 299 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 CST2P09228 141 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 MMP7P09237 267 aaPredicted RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 DAOP14920 347 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 ZNF26P17031 533 aaPredicted RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 USF1P22415 310 aaPredicted RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 STOMP27105 288 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 NOS3P29474 1203 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 SDHAP31040 664 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 SLC6A6P31641 620 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 IFNGR2P38484 337 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 RAD52P43351 418 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 ALDH3B1P43353 468 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 KLF3P57682 345 aaPredicted RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 PCBD1P61457 104 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 ERVS71-1P61550 626 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 GLO1Q04760 184 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 MSMPQ1L6U9 139 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 MTX3Q5HYI7 312 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 FAM27BQ5VT28 67 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 GPR139Q6DWJ6 353 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 ZNF774Q6NX45 483 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 SMARCD3Q6STE5 483 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 THSD4Q6ZMP0 1018 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 LRP11Q86VZ4 500 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 JAZF1Q86VZ6 243 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 DHFR2Q86XF0 187 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 ARHGAP24Q8N264 748 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 CPEB3Q8NE35 698 aaKnown RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 OR10H5Q8NGA6 315 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 OR1J1Q8NGS3 322 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 SYNPRQ8TBG9 265 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 BCAS4Q8TDM0 211 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 SNX33Q8WV41 574 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 NEU4Q8WWR8 484 aaPredicted RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 C11orf40Q8WZ69 217 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 DHRS1Q96LJ7 313 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 LRGUKQ96M69 825 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 ERMAPQ96PL5 475 aaPredicted RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 IFT27Q9BW83 186 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 ZNF416Q9BWM5 594 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 BCL2L14Q9BZR8 327 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 OR2H1Q9GZK4 316 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 SYT4Q9H2B2 425 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 OR52D1Q9H346 318 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 MUC13Q9H3R2 512 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 MYOZ1Q9NP98 299 aaPredicted RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 IL1RAPQ9NPH3 570 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 NRIP3Q9NQ35 241 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 MYEF2Q9P2K5 600 aaKnown RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 EIF3KQ9UBQ5 218 aaKnown RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 REV1Q9UBZ9 1251 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 GPR160Q9UJ42 338 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 ADAM21Q9UKJ8 722 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 TIMM10BQ9Y5J6 103 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 CHD3Q12873 2000 aaKnown RBP7.05□□□□□ -1.28
SNX1-207ENST00000559401 NF1P21359 2839 aa7.05□□□□□ -1.28
SNX1-207ENST00000559401 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
SNX1-207ENST00000559401 TLN2Q9Y4G6 2542 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 LOC390937A0A1W2PQ73 354 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 NDUFS8O00217 210 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 TNFRSF11BO00300 401 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 TPD52L2O43399 206 aaKnown RBP7.04□□□□□ -1.28
SNX1-207ENST00000559401 CD5LO43866 347 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 DOK2O60496 412 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 PTP4A3O75365 173 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 KHDRBS3O75525 346 aaKnown RBP7.04□□□□□ -1.28
SNX1-207ENST00000559401 SNAP29O95721 258 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 CLPTM1O96005 669 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 RENP00797 406 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 MT-ND5P03915 603 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 CTLA4P16410 223 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 ZNF16P17020 682 aaPredicted RBP7.04□□□□□ -1.28
SNX1-207ENST00000559401 FPR3P25089 353 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 GCH1P30793 250 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 NR4A2P43354 598 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 HTR5AP47898 357 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 EVX1P49640 407 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 UCP2P55851 309 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 PSG4Q00888 419 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 KRTAP1-1Q07627 177 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 LOXL1Q08397 574 aaPredicted RBP7.04□□□□□ -1.28
SNX1-207ENST00000559401 SCRN3Q0VDG4 424 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 ENDOGQ14249 297 aaKnown RBP7.04□□□□□ -1.28
SNX1-207ENST00000559401 TRIM25Q14258 630 aaKnown RBP7.04□□□□□ -1.28
SNX1-207ENST00000559401 TMEM249Q2WGJ8 235 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 FAM98BQ52LJ0 330 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms