RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 XKRYO14609 159 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 SYNGR3O43761 229 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 CD5LO43866 347 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 PTP4A3O75365 173 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 PTHP01270 115 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 CST2P09228 141 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 FAM157BP0CG42 384 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 CALB2P22676 271 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 APEX1P27695 318 aaKnown RBP9.41□□□□□ -0.9
SPG11-216ENST00000559347 LAP3P28838 519 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 PCSK6P29122 969 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 SDHAP31040 664 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 RRM2P31350 389 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 EVX1P49640 407 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 ERVS71-1P61550 626 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 HSF2Q03933 536 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 PLP2Q04941 152 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 LOXL1Q08397 574 aaPredicted RBP9.41□□□□□ -0.9
SPG11-216ENST00000559347 ENDOGQ14249 297 aaKnown RBP9.41□□□□□ -0.9
SPG11-216ENST00000559347 SGCAQ16586 387 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 MTX3Q5HYI7 312 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 FAM27BQ5VT28 67 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 CYP2R1Q6VVX0 501 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 LRP11Q86VZ4 500 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 ZDHHC21Q8IVQ6 265 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 ARHGAP24Q8N264 748 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 ZCCHC24Q8N2G6 241 aaKnown RBP9.41□□□□□ -0.9
SPG11-216ENST00000559347 CPEB3Q8NE35 698 aaKnown RBP9.41□□□□□ -0.9
SPG11-216ENST00000559347 FANK1Q8TC84 345 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 NSL1Q96IY1 281 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 SYT3Q9BQG1 590 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 PIMREGQ9BSJ6 248 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 RAB1BQ9H0U4 201 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 KCNN2Q9H2S1 579 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 MUC13Q9H3R2 512 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 TPK1Q9H3S4 243 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 CCNB1IP1Q9NPC3 277 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 IL1RAPQ9NPH3 570 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 FZR1Q9UM11 496 aa9.41□□□□□ -0.9
SPG11-216ENST00000559347 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.4□□□□□ -0.9
SPG11-216ENST00000559347 SVEP1Q4LDE5 3571 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 LOC390937A0A1W2PQ73 354 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 TCRBV5S2A0A599 114 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 PRSS37A4D1T9 235 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 AHCYL1O43865 530 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 TP53P04637 393 aaPredicted RBP9.4□□□□□ -0.9
SPG11-216ENST00000559347 ERCC1P07992 297 aaPredicted RBP9.4□□□□□ -0.9
SPG11-216ENST00000559347 ADRA2AP08913 450 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 T-ENOLP0DO92 83 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 CTLA4P16410 223 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 MSR1P21757 451 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 FPR3P25089 353 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 APLNRP35414 380 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 MAGEA2P43356 314 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 SMIM11AP58511 58 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 PSG4Q00888 419 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 MAD2L1BPQ15013 274 aaPredicted RBP9.4□□□□□ -0.9
SPG11-216ENST00000559347 TMEM249Q2WGJ8 235 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 GPR139Q6DWJ6 353 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 LCN8Q6JVE9 175 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 RGS7BPQ6MZT1 257 aaPredicted RBP9.4□□□□□ -0.9
SPG11-216ENST00000559347 SMARCD3Q6STE5 483 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 RINLQ6ZS11 566 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 PTCHD4Q6ZW05 846 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 ZER1Q7Z7L7 766 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 ADCK1Q86TW2 530 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 OR1J2Q8NGS2 313 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 AKR7LQ8NHP1 331 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 NEU4Q8WWR8 484 aaPredicted RBP9.4□□□□□ -0.9
SPG11-216ENST00000559347 POM121L2Q96KW2 1035 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 ZNF416Q9BWM5 594 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 BCL2L14Q9BZR8 327 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 OR2H1Q9GZK4 316 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 WNT5BQ9H1J7 359 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 SYT4Q9H2B2 425 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 OR51B6Q9H340 312 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 OR52D1Q9H346 318 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 POLE4Q9NR33 117 aa9.4□□□□□ -0.9
SPG11-216ENST00000559347 VSX1Q9NZR4 365 aaPredicted RBP9.4□□□□□ -0.9
SPG11-216ENST00000559347 MALRD1Q5VYJ5 2156 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 IGLV3-9A0A075B6K5 115 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 LOC100509620A0A075B734 347 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 SOCS2O14508 198 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 IMPA2O14732 288 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 OR10H3O60404 316 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 ICMTO60725 284 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 PPP1R3DO95685 299 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 TXNDC12O95881 172 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 SCG5P05408 212 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 DAOP14920 347 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 ZNF250P15622 560 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 STOMP27105 288 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 WNT5AP41221 380 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 ALDH3B1P43353 468 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 NR4A2P43354 598 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 PPP2R2BQ00005 443 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 CARTPTQ16568 116 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 PGBD2Q6P3X8 592 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 DPY19L2P2Q6ZN68 376 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 ZNF101Q8IZC7 436 aa9.39□□□□□ -0.91
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