RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 FAM27BQ5VT28 67 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 SHQ1Q6PI26 577 aaKnown RBP10.72□□□□□ -0.69
SMAD3-205ENST00000558428 DNM1P34Q6PK57 102 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 ATG16L2Q8NAA4 619 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 OR2T33Q8NG76 320 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 OR52E2Q8NGJ4 325 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 TEX47Q8TBZ9 253 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 NRBF2Q96F24 287 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 TSSK2Q96PF2 358 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 RAB3IPQ96QF0 476 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-205ENST00000558428 SNX18Q96RF0 628 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 FOXC2Q99958 501 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 DHRS9Q9BPW9 319 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 BDH2Q9BUT1 245 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 RPRD1BQ9NQG5 326 aaKnown RBP10.72□□□□□ -0.69
SMAD3-205ENST00000558428 POLE4Q9NR33 117 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 FAIMQ9NVQ4 179 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 BEX4Q9NWD9 120 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-205ENST00000558428 KIF17Q9P2E2 1029 aa10.72□□□□□ -0.69
SMAD3-205ENST00000558428 COA3Q9Y2R0 106 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-205ENST00000558428 IQCMA0A1B0GVH7 501 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 SMPD2O60906 423 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 SERPINA5P05154 406 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 SCG5P05408 212 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 CST2P09228 141 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 MMP7P09237 267 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-205ENST00000558428 ZNF32P17041 273 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 POU1F1P28069 291 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 TTKP33981 857 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 MAP1AP78559 2803 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-205ENST00000558428 HSF2Q03933 536 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 PLP2Q04941 152 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 ARFGEF3Q5TH69 2177 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 AGAP6Q5VW22 663 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 ZNF544Q6NX49 715 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 VHLLQ6RSH7 139 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 AMIGO2Q86SJ2 522 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 ZNF584Q8IVC4 421 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 GLB1L2Q8IW92 636 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 FBXL14Q8N1E6 418 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 MUC15Q8N387 334 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 LNX2Q8N448 690 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 OR4F15Q8NGB8 312 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 OR4Q3Q8NH05 313 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 OR5K1Q8NHB7 308 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 PYDC1Q8WXC3 89 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 LRTOMTQ8WZ04 291 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 FBXO17Q96EF6 278 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 ZNF416Q9BWM5 594 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 FN3KQ9H479 309 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 CXorf56Q9H5V9 222 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 SRA1Q9HD15 236 aaKnown RBP10.71□□□□□ -0.69
SMAD3-205ENST00000558428 EMC7Q9NPA0 242 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 REV1Q9UBZ9 1251 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 BAIAP2Q9UQB8 552 aa10.71□□□□□ -0.69
SMAD3-205ENST00000558428 OR6C68A6NDL8 312 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 C12orf71A8MTZ7 269 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 DCTN6O00399 190 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 TMCC2O75069 709 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 PTHP01270 115 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 OSMP13725 252 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 ZNF23P17027 643 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 APOBEC3AP31941 199 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-205ENST00000558428 PCBD1P61457 104 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 GALK2Q01415 458 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 HGFACQ04756 655 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 ENDOGQ14249 297 aaKnown RBP10.7□□□□□ -0.7
SMAD3-205ENST00000558428 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 KRT80Q6KB66 452 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 UGT2A3Q6UWM9 527 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 YTHDF3Q7Z739 585 aaKnown RBP10.7□□□□□ -0.7
SMAD3-205ENST00000558428 DTX2Q86UW9 622 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 HIPK1Q86Z02 1210 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 OR6V1Q8N148 313 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 IQCF1Q8N6M8 205 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 CYB561A3Q8NBI2 242 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 NPEPL1Q8NDH3 523 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 SLC30A7Q8NEW0 376 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 NUP37Q8NFH4 326 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 AKR7LQ8NHP1 331 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 IGFBPL1Q8WX77 278 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 TRAF4Q9BUZ4 470 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-205ENST00000558428 RACGAP1Q9H0H5 632 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 SEMA6AQ9H2E6 1030 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 C1orf198Q9H425 327 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 CA10Q9NS85 328 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 KLHL21Q9UJP4 597 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 B9D1Q9UPM9 204 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 SPEF1Q9Y4P9 236 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 FKBP7Q9Y680 259 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 CELSR1Q9NYQ6 3014 aa10.7□□□□□ -0.7
SMAD3-205ENST00000558428 IGLV1-36A0A0B4J1U3 117 aa10.69□□□□□ -0.7
SMAD3-205ENST00000558428 FAM171A2A8MVW0 826 aa10.69□□□□□ -0.7
SMAD3-205ENST00000558428 G3V2T6 193 aa10.69□□□□□ -0.7
SMAD3-205ENST00000558428 MPZL1O95297 269 aa10.69□□□□□ -0.7
SMAD3-205ENST00000558428 GPANK1O95872 356 aa10.69□□□□□ -0.7
SMAD3-205ENST00000558428 CD8AP01732 235 aa10.69□□□□□ -0.7
SMAD3-205ENST00000558428 CCL2P13500 99 aa10.69□□□□□ -0.7
SMAD3-205ENST00000558428 ZNF35P13682 527 aa10.69□□□□□ -0.7
SMAD3-205ENST00000558428 APEX1P27695 318 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms