RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 WHAMMP3Q1A5X7 153 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 MTX3Q5HYI7 312 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 COX20Q5RI15 118 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 KPRPQ5T749 579 aaPredicted RBP4.34□□□□□ -1.71
SPG11-208ENST00000558155 ARL9Q6T311 187 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 BRD3OSQ6XYD6 125 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 WDR88Q6ZMY6 472 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 GDPGP1Q6ZNW5 385 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 SLC35D2Q76EJ3 337 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 HIST3H2AQ7L7L0 130 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 ALDH16A1Q8IZ83 802 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 C4orf33Q8N1A6 199 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 LRRC18Q8N456 261 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 POU5F2Q8N7G0 328 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 ZNF283Q8N7M2 679 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 NOA1Q8NC60 698 aaKnown RBP4.34□□□□□ -1.71
SPG11-208ENST00000558155 BHLHE22Q8NFJ8 381 aaPredicted RBP4.34□□□□□ -1.71
SPG11-208ENST00000558155 OR4K5Q8NGD3 323 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 OR5J2Q8NH18 312 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 SLC25A40Q8TBP6 338 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 GEMIN6Q8WXD5 167 aaKnown RBP4.34□□□□□ -1.71
SPG11-208ENST00000558155 HIST1H2ACQ93077 130 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 SLC25A44Q96H78 314 aaPredicted RBP4.34□□□□□ -1.71
SPG11-208ENST00000558155 ZBTB18Q99592 522 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 RHOXF2Q9BQY4 288 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 NUDT16L1Q9BRJ7 211 aaKnown RBP4.34□□□□□ -1.71
SPG11-208ENST00000558155 OR2J1Q9GZK6 312 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 ELOVL3Q9HB03 270 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 MSL2Q9HCI7 577 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 CCNB1IP1Q9NPC3 277 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 TPSG1Q9NRR2 321 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 MAN2C1Q9NTJ4 1040 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 PYCARDQ9ULZ3 195 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 PPP1R3CQ9UQK1 317 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 CHST2Q9Y4C5 530 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 TANC2Q9HCD6 1990 aa4.34□□□□□ -1.71
SPG11-208ENST00000558155 VWFP04275 2813 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 TET2Q6N021 2002 aaPredicted RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 IGKV1D-42A0A075B6H8 117 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 C5orf49A4QMS7 147 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 SMIM23A6NLE4 172 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 CEACAM18A8MTB9 384 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 C5orf58C9J3I9 102 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 TMEM178BH3BS89 294 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 P2RY10O00398 339 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 RFXANKO14593 260 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 TNFRSF13BO14836 293 aaPredicted RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 RNF13O43567 381 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 TIMM8AO60220 97 aaPredicted RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 ANP32DO95626 131 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 MT-ATP6P00846 226 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 IGHG1P01857 330 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 PRB2P02812 416 aaPredicted RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 OPN1MWP04001 364 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 LIPFP07098 398 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 MELTFP08582 738 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 OPN1MW2P0DN77 364 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 OPN1MW3P0DN78 364 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 ETFAP13804 333 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 RPS2P15880 293 aaKnown RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 TUBG1P23258 451 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 GATA4P43694 442 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 CLRN1P58418 232 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 NCALDP61601 193 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 UFM1P61960 85 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 PPP1CBP62140 327 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 BST1Q10588 318 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 ZMYND11Q15326 602 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 SPRNQ5BIV9 151 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 PABPC1L2AQ5JQF8 200 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 SPATA46Q5T0L3 261 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 SAMD5Q5TGI4 173 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 RUSC1-AS1Q66K80 236 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 SLC27A4Q6P1M0 643 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 Q6ZTK2 550 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 NLRC3Q7RTR2 1065 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 KLBQ86Z14 1044 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 KIRREL3Q8IZU9 778 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 ZSCAN4Q8NAM6 433 aaPredicted RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 OR2Z1Q8NG97 314 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 OR8B3Q8NGG8 313 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 VANGL1Q8TAA9 524 aaPredicted RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 ABHD4Q8TB40 342 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 IPCEF1Q8WWN9 437 aaPredicted RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 GATAD2BQ8WXI9 593 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 MCHR2Q969V1 340 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 NEIL1Q96FI4 390 aaPredicted RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 TMEM19Q96HH6 336 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 POM121L2Q96KW2 1035 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 PPP1R36Q96LQ0 422 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 MOGAT1Q96PD6 335 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 OR8B2Q96RD0 313 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 ARHGDIGQ99819 225 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 TMEM43Q9BTV4 400 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 SPATA5L1Q9BVQ7 753 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 TRIM15Q9C019 465 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 RASSF4Q9H2L5 321 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 DPAGT1Q9H3H5 408 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 C16orf95Q9H693 158 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 SIAEQ9HAT2 523 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms