RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 BAIAP2Q9UQB8 552 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 PLEKHA6Q9Y2H5 1048 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 NAV2Q8IVL1 2488 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 SPG11Q96JI7 2443 aa12.47□□□□□ -0.41
USP3-205ENST00000557884 IGLV1-36A0A0B4J1U3 117 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 RIIAD1A6NNX1 92 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 ATP6V1G2-DDX39BF2Z307 99 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 HS3ST1O14792 307 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 BAG2O95816 211 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 IFNGP01579 166 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 MSR1P21757 451 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 CRABP1P29762 137 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 CALCRP30988 508 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 PYCR1P32322 319 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 GRK5P34947 590 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 NAAAQ02083 359 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 CRMP1Q14194 572 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 NRN1LQ496H8 165 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
USP3-205ENST00000557884 SLC27A4Q6P1M0 643 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 B3GLCTQ6Y288 498 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 OR6V1Q8N148 313 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 FAM169BQ8N8A8 192 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 OR9Q1Q8NGQ5 310 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 LILRB1Q8NHL6 650 aaPredicted RBP12.46□□□□□ -0.41
USP3-205ENST00000557884 DNAJC9Q8WXX5 260 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 STMN2Q93045 179 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 FBXO17Q96EF6 278 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 SNX18Q96RF0 628 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 ZNF416Q9BWM5 594 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 KCNN2Q9H2S1 579 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 MOV10Q9HCE1 1003 aaKnown RBP12.46□□□□□ -0.41
USP3-205ENST00000557884 CCNB1IP1Q9NPC3 277 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 KLHL21Q9UJP4 597 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 ATP23Q9Y6H3 246 aa12.46□□□□□ -0.41
USP3-205ENST00000557884 CACNA1DQ01668 2161 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 CST2P09228 141 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 MMP7P09237 267 aaPredicted RBP12.45□□□□□ -0.42
USP3-205ENST00000557884 ZNF14P17017 642 aaPredicted RBP12.45□□□□□ -0.42
USP3-205ENST00000557884 ZNF3P17036 446 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 ZNF32P17041 273 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 PAX7P23759 505 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 IGFBP5P24593 272 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 CRISP1P54107 249 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 HSF2Q03933 536 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 ENDOGQ14249 297 aaKnown RBP12.45□□□□□ -0.42
USP3-205ENST00000557884 MEP1BQ16820 701 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 C3orf36Q3SXR2 165 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 ZNF362Q5T0B9 420 aaPredicted RBP12.45□□□□□ -0.42
USP3-205ENST00000557884 FAM27BQ5VT28 67 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 KDM4DQ6B0I6 523 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 PAMR1Q6UXH9 720 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 DPPA2Q7Z7J5 298 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 ZNF584Q8IVC4 421 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 DEPDC4Q8N2C3 294 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 PQLC1Q8N2U9 271 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 OR51L1Q8NGJ5 315 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 AKR7LQ8NHP1 331 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 C11orf40Q8WZ69 217 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 OTULINQ96BN8 352 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 ZNF75AQ96N20 296 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 DDOQ99489 341 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 MED20Q9H944 212 aa12.45□□□□□ -0.42
USP3-205ENST00000557884 AKAP6Q13023 2319 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 IGHV2OR16-5A0A0B4J2B6 119 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 FAM183AA6NL82 134 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 E7EQL1 145 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 CRYAAP02489 173 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 GYPBP06028 91 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 GAAP10253 952 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 CCL2P13500 99 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 PABPC1L2AQ5JQF8 200 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 PARP8Q8N3A8 854 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 PROKR2Q8NFJ6 384 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 ZNRF4Q8WWF5 429 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 CIB1Q99828 191 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 RBM4Q9BWF3 364 aaKnown RBP12.44□□□□□ -0.42
USP3-205ENST00000557884 RACGAP1Q9H0H5 632 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 RIBC2Q9H4K1 309 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 CMC2Q9NRP2 79 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 CISD1Q9NZ45 108 aaKnown RBP12.44□□□□□ -0.42
USP3-205ENST00000557884 TMEFF2Q9UIK5 374 aaPredicted RBP12.44□□□□□ -0.42
USP3-205ENST00000557884 ST6GALNAC2Q9UJ37 374 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 POLR1DQ9Y2S0 133 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 FKBP7Q9Y680 259 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 ROS1P08922 2347 aa12.44□□□□□ -0.42
USP3-205ENST00000557884 C12orf71A8MTZ7 269 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 EI24O14681 340 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 SURF4O15260 269 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 MGRN1O60291 552 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 HLA-DQA2P01906 255 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 HMGN1P05114 100 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 SERPINA5P05154 406 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 CLUP10909 449 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 EPHA2P29317 976 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 PCBD1P61457 104 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 PPP2R2BQ00005 443 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 CDK5Q00535 292 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 PSG4Q00888 419 aa12.43□□□□□ -0.42
USP3-205ENST00000557884 PLP2Q04941 152 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms