RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 FBXO4Q9UKT5 387 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC22A13Q9Y226 551 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 A0A0A6YYC8 382 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 I3L1I5 382 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 HCRTR1O43613 425 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 RAD1O60671 282 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 ALOX12BO75342 701 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 HLA-AP01891 365 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 CD74P04233 296 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF735P0CB33 412 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 IGLV3-21P80748 117 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 SKP2Q13309 424 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 CD226Q15762 336 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 DEFB110Q30KQ9 67 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 LRRC37A5PQ49AS3 106 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 VWA2Q5GFL6 755 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF679Q8IYX0 411 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 PATE1Q8WXA2 126 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 GAL3ST1Q99999 423 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 UBQLN4Q9NRR5 601 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 CPNE7Q9UBL6 633 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 MSRAQ9UJ68 235 aa10.67□□□□□ -0.7
VIPAS39-211ENST00000557658 A0A0A6YYH2 397 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 RAB19A4D1S5 217 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 LINC01553A4QN01 128 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 RNF222A6NCQ9 220 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 A6NJ64 397 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 DISC1C4P0D8 188 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 H7C2Y5 167 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 XKRYO14609 159 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 TNFRSF10CO14798 259 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 SMAD9O15198 467 aaKnown RBP10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 ATG12O94817 140 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 KIR2DL1P43626 348 aaPredicted RBP10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 MEF2DQ14814 521 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 BEX5Q5H9J7 111 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 GLYATL3Q5SZD4 288 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 PRAMEF17Q5VTA0 474 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 FNDC7Q5VTL7 733 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 ASPHD2Q6ICH7 369 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC35D2Q76EJ3 337 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 ADGRE4PQ86SQ3 457 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 SEC22AQ96IW7 307 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 BMFQ96LC9 184 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 TSNAXQ99598 290 aaKnown RBP10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 PLA2G2FQ9BZM2 168 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 GAREM1Q9H706 876 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC39A1Q9NY26 324 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 NDRG3Q9UGV2 375 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 FARSAQ9Y285 508 aaKnown RBP10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 KCNK7Q9Y2U2 307 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 KLF2Q9Y5W3 355 aaPredicted RBP10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 BLACEA4D250 179 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 SCDO00767 359 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 CLDN4O14493 209 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 CCSO14618 274 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF28P17035 718 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 CENPAP49450 140 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 SKP1P63208 163 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 CTAG1AP78358 180 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 FUT7Q11130 342 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 ATXN7L3Q14CW9 347 aaPredicted RBP10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 TEX30Q5JUR7 227 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 SHEQ5VZ18 495 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC18B1Q6NT16 456 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 CBLN3Q6UW01 205 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 MED25Q71SY5 747 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 NDUFAF7Q7L592 441 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 NUP54Q7Z3B4 507 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 OR13C8Q8NGS7 320 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF563Q8TA94 476 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 THAP6Q8TBB0 222 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 PPP1R1CQ8WVI7 109 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 TAAR8Q969N4 342 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 ELSPBP1Q96BH3 223 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 ELF4Q99607 663 aaPredicted RBP10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 NKX3-1Q99801 234 aaPredicted RBP10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 PTDSS2Q9BVG9 487 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 TAS2R4Q9NYW5 299 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 PRODH2Q9UF12 536 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 ALPK2Q86TB3 2170 aa10.66□□□□□ -0.7
VIPAS39-211ENST00000557658 A0A1W2PPC1 479 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 F5H0A9 414 aaPredicted RBP10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 K7EQS6 105 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF264O43296 627 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 DOK2O60496 412 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 OR6A2O95222 327 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 PNPP00491 289 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 CTSBP07858 339 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 HLA-GP17693 338 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 TACR3P29371 465 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 NTSR1P30989 418 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 GDI1P31150 447 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 PPP1CAP62136 330 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 UBE2IP63279 158 aaKnown RBP10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 BTG2P78543 158 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 PMPCAQ10713 525 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 ERV3-1Q14264 604 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 HYAL4Q2M3T9 481 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 ALG11Q2TAA5 492 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms