RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 RPS9P46781 194 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 OR1D4P47884 311 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 RPL14P50914 215 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 CNN1P51911 297 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 HNRNPFP52597 415 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 CASP9P55211 416 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 PKNOX1P55347 436 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 STARD6P59095 220 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 RPS21P63220 83 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 STX3Q13277 289 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 EBI3Q14213 229 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 CHI3L2Q15782 390 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 CHRNA6Q15825 494 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 GGTA1PQ4G0N0 100 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 EOGTQ5NDL2 527 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 ZNF678Q5SXM1 525 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 PTRHD1Q6GMV3 140 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 SULT1C3Q6IMI6 304 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 SBSNQ6UWP8 590 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 FAM151BQ6UXP7 276 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 ADAMTSL5Q6ZMM2 481 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 TRPM8Q7Z2W7 1104 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 EFL1Q7Z2Z2 1120 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 HSD11B1LQ7Z5J1 315 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 TRIM69Q86WT6 500 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 CRLF3Q8IUI8 442 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 C10orf107Q8IVU9 208 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 UBALD2Q8IYN6 164 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 OTUD6BQ8N6M0 293 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 GPATCH11Q8N954 259 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 OR6K2Q8NGY2 324 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 KCTD4Q8WVF5 259 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 ANKRD49Q8WVL7 239 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 ASZ1Q8WWH4 475 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 ZNF382Q96SR6 550 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 KLF6Q99612 283 aaPredicted RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 GPR21Q99679 349 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 TIMM29Q9BSF4 260 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 ILKAPQ9H0C8 392 aaPredicted RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 CAB39LQ9H9S4 337 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 MEAF6Q9HAF1 191 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 SGK2Q9HBY8 427 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 EML4Q9HC35 981 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 SLCO1B3Q9NPD5 702 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 DYRK4Q9NR20 520 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 SAR1AQ9NR31 198 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 CRLS1Q9UJA2 301 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 TRMT6Q9UJA5 497 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 MOSPD1Q9UJG1 213 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 PTBP2Q9UKA9 531 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 MMP17Q9ULZ9 603 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 STRAPQ9Y3F4 350 aaKnown RBP2.51□□□□□ -2.01
VRK1-207ENST00000557352 OARD1Q9Y530 152 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 FLVCR1Q9Y5Y0 555 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 LAMA1P25391 3075 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 GTF3C1Q12789 2109 aa2.51□□□□□ -2.01
VRK1-207ENST00000557352 WDR87Q6ZQQ6 2873 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 NPIPA5A0A0B4J1W7 369 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 SLC5A10A0PJK1 596 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CFAP73A6NFT4 308 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 MGAT4DA6NG13 374 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 NPIPA5E9PKD4 350 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 KRTAP4-16G5E9R7 235 aaPredicted RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 TLR4O00206 839 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CCL22O00626 93 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 ZBTB14O43829 449 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 OR1I1O60431 355 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 NIPSNAP2O75323 286 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 PSIP1O75475 530 aaKnown RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 CA11O75493 328 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 TM7SF2O76062 418 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 SLC25A14O95258 325 aaPredicted RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 SYNGR4O95473 234 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 ERGP11308 486 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 PSG2P11465 335 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 NEFHP12036 1026 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 FUT3P21217 361 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 BGNP21810 368 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CCR7P32248 378 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 HSD17B2P37059 387 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 ALDH3B2P48448 385 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 PSMD8P48556 350 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 PITPNBP48739 271 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 ACADVLP49748 655 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 MNAT1P51948 309 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 RPS14P62263 151 aaKnown RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 RPS4XP62701 263 aaKnown RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 KDSRQ06136 332 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 BNIP1Q12981 228 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 KLF5Q13887 457 aaPredicted RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 ARHGAP19Q14CB8 494 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 TGFBIQ15582 683 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 OR4D1Q15615 310 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 HKDC1Q2TB90 917 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 HFEQ30201 348 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 GLYR1Q49A26 553 aaPredicted RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 CMPK2Q5EBM0 449 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 XKR7Q5GH72 579 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CFAP157Q5JU67 520 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 TCHHL1Q5QJ38 904 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms