RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 ZNF718Q3SXZ3 478 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 PATL1Q86TB9 770 aaKnown RBP12.52□□□□□ -0.41
CHD8-211ENST00000556833 MICU2Q8IYU8 434 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 SGMS2Q8NHU3 365 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 KLF14Q8TD94 323 aaPredicted RBP12.52□□□□□ -0.41
CHD8-211ENST00000556833 DYDC1Q8WWB3 177 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 NABP1Q96AH0 204 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 SGTBQ96EQ0 304 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 MARS2Q96GW9 593 aaKnown RBP12.52□□□□□ -0.41
CHD8-211ENST00000556833 MPP4Q96JB8 637 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 POM121L2Q96KW2 1035 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 ZNF426Q9BUY5 554 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 MRPL13Q9BYD1 178 aaKnown RBP12.52□□□□□ -0.41
CHD8-211ENST00000556833 EIF3KQ9UBQ5 218 aaKnown RBP12.52□□□□□ -0.41
CHD8-211ENST00000556833 NDUFAF1Q9Y375 327 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 GMEB1Q9Y692 573 aa12.52□□□□□ -0.41
CHD8-211ENST00000556833 IGHV3OR16-10A0A075B7F0 116 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 A0A1W2PPL8 197 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 UBOX5O94941 541 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 MT-ND1P03886 318 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 SBK2P0C263 348 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 OR1E2P47887 323 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 LIMS1P48059 325 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 DAP3P51398 398 aaKnown RBP12.51□□□□□ -0.41
CHD8-211ENST00000556833 SEC61A1P61619 476 aaKnown RBP12.51□□□□□ -0.41
CHD8-211ENST00000556833 PPP1CBP62140 327 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 PIN1Q13526 163 aaPredicted RBP12.51□□□□□ -0.41
CHD8-211ENST00000556833 OTPQ5XKR4 325 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 ZNF774Q6NX45 483 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 DPPA2Q7Z7J5 298 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 BCL6BQ8N143 479 aaPredicted RBP12.51□□□□□ -0.41
CHD8-211ENST00000556833 ST7LQ8TDW4 575 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 WNT5BQ9H1J7 359 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 POFUT1Q9H488 388 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 KAT8Q9H7Z6 458 aaKnown RBP12.51□□□□□ -0.41
CHD8-211ENST00000556833 SIAEQ9HAT2 523 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 NPHS2Q9NP85 383 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 MMP26Q9NRE1 261 aa12.51□□□□□ -0.41
CHD8-211ENST00000556833 DDX28Q9NUL7 540 aaKnown RBP12.51□□□□□ -0.41
CHD8-211ENST00000556833 H7C1C5 153 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 J3QLI3 93 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 TIMM8AO60220 97 aaPredicted RBP12.5□□□□□ -0.41
CHD8-211ENST00000556833 ERLIN1O75477 346 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 LAP3P28838 519 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 LCN6P62502 163 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 MRPS34P82930 218 aaKnown RBP12.5□□□□□ -0.41
CHD8-211ENST00000556833 TNFAIP6P98066 277 aaPredicted RBP12.5□□□□□ -0.41
CHD8-211ENST00000556833 SF3A3Q12874 501 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHD8-211ENST00000556833 TAF11Q15544 211 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 MOGQ16653 247 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 ARMCX4Q5H9R4 360 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 RABL3Q5HYI8 236 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 C10orf128Q5T292 105 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 ARMC4Q5T2S8 1044 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 JAZF1Q86VZ6 243 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 TEX29Q8N6K0 151 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 TMEM239Q8WW34 195 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 SLC19A3Q9BZV2 496 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 OR2H1Q9GZK4 316 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 EGLN1Q9GZT9 426 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 ZNF69Q9UC07 566 aa12.5□□□□□ -0.41
CHD8-211ENST00000556833 DNAJC9-AS1A6NH13 148 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 TMPRSS2O15393 492 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 FSHBP01225 129 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 FUT4P22083 530 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 FPR2P25090 351 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 VMACQ2NL98 169 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 MMEL1Q495T6 779 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 FAM209AQ5JX71 171 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 BEND6Q5SZJ8 279 aaPredicted RBP12.49□□□□□ -0.41
CHD8-211ENST00000556833 SLC25A47Q6Q0C1 308 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 DPP10Q8N608 796 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 DVL3Q92997 716 aaPredicted RBP12.49□□□□□ -0.41
CHD8-211ENST00000556833 SEPHS2Q99611 448 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 PCDHAC1Q9H158 963 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 EMC7Q9NPA0 242 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 EGFL7Q9UHF1 273 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 RIMS3Q9UJD0 308 aa12.49□□□□□ -0.41
CHD8-211ENST00000556833 SOX21Q9Y651 276 aaPredicted RBP12.49□□□□□ -0.41
CHD8-211ENST00000556833 TRRAPQ9Y4A5 3859 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 TRAV27A0A087WT01 109 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 IGHV3-64DA0A0J9YX35 117 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 ZNF205O95201 554 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 YAP1P46937 504 aaKnown RBP12.48□□□□□ -0.41
CHD8-211ENST00000556833 GZMMP51124 257 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 NRN1LQ496H8 165 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 LRRC23Q53EV4 343 aaPredicted RBP12.48□□□□□ -0.41
CHD8-211ENST00000556833 ALG10Q5BKT4 473 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 TTMPQ5BVD1 217 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 INTS11Q5TA45 600 aaKnown RBP12.48□□□□□ -0.41
CHD8-211ENST00000556833 AGBL2Q5U5Z8 902 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 MBNL2Q5VZF2 373 aaKnown RBP12.48□□□□□ -0.41
CHD8-211ENST00000556833 C1orf94Q6P1W5 598 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 RBMS3Q6XE24 437 aaKnown RBP12.48□□□□□ -0.41
CHD8-211ENST00000556833 HDDC2Q7Z4H3 204 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 TREML1Q86YW5 311 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 SLC30A8Q8IWU4 369 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 DEFB108BQ8NET1 73 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 OR2Z1Q8NG97 314 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 NMD3Q96D46 503 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms