RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 LRRC61Q9BV99 259 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 TRIM4Q9C037 500 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 POLR2J2Q9GZM3 115 aaKnown RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 POLR2J3Q9H1A7 115 aaKnown RBP4.56□□□□□ -1.68
SRP54-211ENST00000556445 OR51I1Q9H343 314 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 DPAGT1Q9H3H5 408 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 KLHL31Q9H511 634 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 GIN1Q9NXP7 522 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 SCN3BQ9NY72 215 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 ABCG2Q9UNQ0 655 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 B9D1Q9UPM9 204 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 OR10H1Q9Y4A9 318 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 ATG4BQ9Y4P1 393 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 GMPPBQ9Y5P6 360 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 CCDC88CQ9P219 2028 aa4.56□□□□□ -1.68
SRP54-211ENST00000556445 HYKKA2RU49 373 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 CCDC160A6NGH7 325 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 PCP4L1A6NKN8 68 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 EIF4E1BA6NMX2 242 aaKnown RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 PRSS46E5RG02 174 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 PPIAL4DF5H284 164 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 MS4A18H0YCH9 400 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 FAAHO00519 579 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ABCD4O14678 606 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 GALR3O60755 368 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 CTSVO60911 334 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 BCAS1O75363 584 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 GCM2O75603 506 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 GPR75O95800 540 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 IGHV2-70P01814 119 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ATP1B1P05026 303 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 HMGN2P05204 90 aaKnown RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 GUSBP08236 651 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 STAG3L2P0CL84 134 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 SMIM18P0DKX4 95 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 OR12D1P0DN82 309 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 RNH1P13489 461 aaKnown RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 CEACAM1P13688 526 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 CPMP14384 443 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 IL9P15248 144 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 GNSP15586 552 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ST6GAL1P15907 406 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 AQP1P29972 269 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 CSTF2P33240 577 aaKnown RBP eCLIP4.55□□□□□ -1.68
SRP54-211ENST00000556445 RORAP35398 523 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 IFNGR2P38484 337 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 FEN1P39748 380 aaKnown RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 GPR4P46093 362 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 XCR1P46094 333 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 CAPZBP47756 277 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ALDH3B2P48448 385 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ARRB1P49407 418 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 CSNK1EP49674 416 aaKnown RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 DAPP51397 102 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 XKP51811 444 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 NUDT6P53370 316 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 CDH12P55289 794 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 CDC42P60953 191 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ITGADQ13349 1161 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 C1orf61Q13536 156 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 C16orf72Q14CZ0 275 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ZNHIT3Q15649 155 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 DEFB134Q4QY38 66 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 C14orf28Q4W4Y0 310 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 FAM76BQ5HYJ3 339 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ZNF311Q5JNZ3 666 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 TMEM31Q5JXX7 168 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ZNF691Q5VV52 312 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 SIGIRRQ6IA17 410 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ZNF773Q6PK81 442 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 DHRS4L2Q6PKH6 230 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 FAM57BQ71RH2 274 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 C16orf62Q7Z3J2 963 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 GPR141Q7Z602 305 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 LUZP2Q86TE4 346 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 C17orf82Q86X59 251 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 KMT5CQ86Y97 462 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 PARP8Q8N3A8 854 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 PARP16Q8N5Y8 322 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ASCC1Q8N9N2 400 aaKnown RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 CDRT4Q8N9R6 151 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 OR10G2Q8NGC3 310 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ZNF420Q8TAQ5 688 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 FAM81AQ8TBF8 368 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ZNF675Q8TD23 568 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 SLC38A5Q8WUX1 472 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 MAL2Q969L2 176 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 TAMM41Q96BW9 452 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 RNF183Q96D59 192 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 C10orf90Q96M02 699 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ZNF681Q96N22 645 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 COL21A1Q96P44 957 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 CCNL2Q96S94 520 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 STACQ99469 402 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 PITX2Q99697 317 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 GABARAPL3Q9BY60 117 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 AICDAQ9GZX7 198 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 ADNPQ9H2P0 1102 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 TCEAL2Q9H3H9 227 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 ANKRD19PQ9H560 264 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms