RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PLA2G12AQ9BZM1 189 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FKRPQ9H9S5 495 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ZBTB20Q9HC78 741 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FAM60AQ9NP50 221 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 NUFIP1Q9UHK0 495 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 MAB21L2Q9Y586 359 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 TTC28Q96AY4 2481 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ARID1BQ8NFD5 2236 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 A0A087WUU8 490 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 NPIPA5A0A0B4J1W7 369 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 H3BN98 237 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 M0R143 59 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 LDB3O75112 727 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ENTPD6O75354 484 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 IGF2P01344 180 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 RRASP10301 218 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 APOBEC3AP31941 199 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 AKR1C3P42330 323 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 CDC42P60953 191 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 RIPPLY1Q0D2K3 151 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 HNRNPA0Q13151 305 aaKnown RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 FGFBP1Q14512 234 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 RSU1Q15404 277 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 DUSP5Q16690 384 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF628Q5EBL2 1059 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ARSJQ5FYB0 599 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 SLC22A10Q63ZE4 541 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 C19orf48Q6RUI8 117 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 TSSK4Q6SA08 328 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 C3P1Q6ZMU1 363 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 MYPOPQ86VE0 399 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 MEX3DQ86XN8 651 aaKnown RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 KDM8Q8N371 416 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 IQCF1Q8N6M8 205 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 FAM83FQ8NEG4 500 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 OR4M2Q8NGB6 313 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 OR10K1Q8NGX5 313 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF675Q8TD23 568 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ABHD3Q8WU67 409 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 LGALS12Q96DT0 336 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 HARBI1Q96MB7 349 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 MS4A4EQ96PG1 132 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 IL4I1Q96RQ9 567 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 CDCA4Q9BXL8 241 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ACTRT3Q9BYD9 372 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 NUAK2Q9H093 628 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 AKIP1Q9NQ31 210 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 WSB2Q9NYS7 404 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 SLC23A1Q9UHI7 598 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 OSGIN1Q9UJX0 560 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 NTNG1Q9Y2I2 539 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF780BQ9Y6R6 833 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 RP1P56715 2156 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM265A0A087WTH1 108 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 SYT5O00445 386 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 FGF17O60258 216 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 KCNK2O95069 426 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ACP2P11117 423 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF35P13682 527 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 SRMP19623 302 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 PSMB6P28072 239 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 CEACAM8P31997 349 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 RAB5CP51148 216 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 SOX8P57073 446 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 SNRPGP62308 76 aaKnown RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 HOXC5Q00444 222 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ID2Q02363 134 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 NDUFA9Q16795 377 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ARHGAP11BQ3KRB8 267 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 SLC35D3Q5M8T2 416 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 KIAA0895LQ68EN5 471 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 BAIAP2L2Q6UXY1 529 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ABHD12BQ7Z5M8 362 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 C1orf162Q8NEQ5 155 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 OR8D4Q8NGM9 314 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 DOK4Q8TEW6 326 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 FCGR1BQ92637 280 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM45BQ96B21 275 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ST6GAL2Q96JF0 529 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 DPCDQ9BVM2 203 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 TAPBPLQ9BX59 468 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 COL25A1Q9BXS0 654 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 POLR2J3Q9H1A7 115 aaKnown RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 RNF167Q9H6Y7 350 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 SEMA4GQ9NTN9 838 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 CNOT2Q9NZN8 540 aaKnown RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 KCNE5Q9UJ90 142 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 TBC1D24Q9ULP9 559 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 LSM2Q9Y333 95 aaKnown RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ADAMTS20P59510 1910 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 CABIN1Q9Y6J0 2220 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 A0A1W2PQL4 384 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 C9orf170A2RU37 121 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 TLR4O00206 839 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 TLX2O43763 284 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 MT-ND5P03915 603 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ATP1B1P05026 303 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 CT62P0C5K7 136 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 PIPP12273 146 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 CPMP14384 443 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms