RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 DCBLD2Q96PD2 775 aa13.43□□□□□ -0.26
NEK9-209ENST00000556170 TAS2R4Q9NYW5 299 aa13.43□□□□□ -0.26
NEK9-209ENST00000556170 MBD2Q9UBB5 411 aa13.43□□□□□ -0.26
NEK9-209ENST00000556170 MRM2Q9UI43 246 aaKnown RBP13.43□□□□□ -0.26
NEK9-209ENST00000556170 KLHDC2Q9Y2U9 406 aa13.43□□□□□ -0.26
NEK9-209ENST00000556170 MAB21L2Q9Y586 359 aa13.43□□□□□ -0.26
NEK9-209ENST00000556170 PLXNB3Q9ULL4 1909 aa13.43□□□□□ -0.26
NEK9-209ENST00000556170 HELZP42694 1942 aaKnown RBP13.42□□□□□ -0.26
NEK9-209ENST00000556170 FRG2CA6NGY1 282 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 GMDSO60547 372 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 ALOX12BO75342 701 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 ZNF28P17035 718 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 RNF4P78317 190 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 IDO2Q6ZQW0 420 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 CCDC107Q8WV48 283 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 ARL5BQ96KC2 179 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 PRRG4Q9BZD6 226 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 HRASLSQ9HDD0 168 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 EMC7Q9NPA0 242 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 TPRP12270 2363 aaKnown RBP13.42□□□□□ -0.26
NEK9-209ENST00000556170 CTLA4P16410 223 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 CD53P19397 219 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 GAS1P54826 345 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 CXADRP78310 365 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 MRGPREQ86SM8 312 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 ATG4DQ86TL0 474 aaPredicted RBP13.42□□□□□ -0.26
NEK9-209ENST00000556170 OR51S1Q8NGJ8 323 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 PGAM5Q96HS1 289 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 MARVELD1Q9BSK0 173 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 ABHD6Q9BV23 337 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 GAREM1Q9H706 876 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 ALKBH4Q9NXW9 302 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 SPTA1P02549 2419 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 NPIPA2E9PIF3 369 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 NPIPA3F8WFD2 350 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 OR2J2O76002 312 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 DAP3P51398 398 aaKnown RBP13.42□□□□□ -0.26
NEK9-209ENST00000556170 CDONQ4KMG0 1287 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 SLC22A6Q4U2R8 563 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 IGSF11Q5DX21 431 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 MESTQ5EB52 335 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 TMEM205Q6UW68 189 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 OR52B4Q8NGK2 314 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 YIPF5Q969M3 257 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 KLHL13Q9P2N7 655 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 PRUNE2Q8WUY3 3088 aa13.42□□□□□ -0.26
NEK9-209ENST00000556170 TRAV1-2A0A0B4J238 106 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 EEF1E1-BLOC1S5C9J1V9 151 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 ZNF878C9JN71 531 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 TRAPPC2P0DI81 140 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 TRAPPC2BP0DI82 140 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 CXCL3P19876 107 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 POU3F3P20264 500 aaPredicted RBP13.41□□□□□ -0.26
NEK9-209ENST00000556170 PTBP1P26599 531 aaKnown RBP eCLIP13.41□□□□□ -0.26
NEK9-209ENST00000556170 HTR2CP28335 458 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 BEX5Q5H9J7 111 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 NKAPLQ5M9Q1 402 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 ALKBH2Q6NS38 261 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 GUSBP11Q6P575 273 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 LRRC18Q8N456 261 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 OR1N1Q8NGS0 311 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 A0A087WV48 116 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 ZNF736B4DX44 427 aaPredicted RBP13.41□□□□□ -0.26
NEK9-209ENST00000556170 EIF4E2O60573 245 aaKnown RBP13.41□□□□□ -0.26
NEK9-209ENST00000556170 GLULP15104 373 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 WDR38Q5JTN6 314 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 ZNF615Q8N8J6 731 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 NIPAL2Q9H841 368 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 FRRS1LQ9P0K9 344 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 GABARAPH6UMI1 98 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 ZNF208O43345 1280 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 WDPCPO95876 746 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 ACSM1Q08AH1 577 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 SKP2Q13309 424 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 SMAD4Q13485 552 aaKnown RBP13.41□□□□□ -0.26
NEK9-209ENST00000556170 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.41□□□□□ -0.26
NEK9-209ENST00000556170 SEC22AQ96IW7 307 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 OR5V1Q9UGF6 321 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 STEAP1Q9UHE8 339 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 ST6GALNAC2Q9UJ37 374 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 HIF3AQ9Y2N7 669 aa13.41□□□□□ -0.26
NEK9-209ENST00000556170 TMIGD3P0DMS9 266 aaPredicted RBP13.4□□□□□ -0.26
NEK9-209ENST00000556170 FOSL1P15407 271 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 RPS4Y1P22090 263 aaKnown RBP13.4□□□□□ -0.26
NEK9-209ENST00000556170 SLC6A1P30531 599 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 NXPH1P58417 271 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 MFSD13AQ14CX5 517 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 C2orf76Q3KRA6 126 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 LYPD8Q6UX82 237 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 H1FNTQ75WM6 255 aaPredicted RBP13.4□□□□□ -0.26
NEK9-209ENST00000556170 BTN2A1Q7KYR7 527 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 ZNF679Q8IYX0 411 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 ZFAND1Q8TCF1 268 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 SMIM4Q8WVI0 70 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 PGLYRP3Q96LB9 341 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 PCDHB16Q9NRJ7 776 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 HAO2Q9NYQ3 351 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 GSKIPQ9P0R6 139 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 UBQLN2Q9UHD9 624 aa13.4□□□□□ -0.26
NEK9-209ENST00000556170 TRAV8-7A0A075B6U6 113 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms