RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 NANOGQ9H9S0 305 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NPHS2Q9NP85 383 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PPIAL4AQ9Y536 164 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 DOCK11Q5JSL3 2073 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PPIAL4EA0A075B759 164 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PPIAL4CA0A0B4J2A2 164 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NPIPB13A6NJU9 1138 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NPIPB4C9JG80 1138 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PPIAL4DF5H284 164 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ENTPD5O75356 428 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 OR7A10O76100 309 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PTHP01270 115 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 IGF2P01344 180 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 IGHV2-70P01814 119 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CD55P08174 381 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PPIAL4FP0DN26 164 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 GATA3P23771 443 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 APLNRP35414 380 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF84P51523 738 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SEC61A1P61619 476 aaKnown RBP12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PLP2Q04941 152 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 LAPTM4AQ15012 233 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CYP51A1Q16850 503 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 BEND6Q5SZJ8 279 aaPredicted RBP12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 FAM27BQ5VT28 67 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CCDC80Q76M96 950 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 BCL6BQ8N143 479 aaPredicted RBP12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 TEX29Q8N6K0 151 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 RAB1CQ92928 201 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 GAL3ST1Q99999 423 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 POFUT1Q9H488 388 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SMURF2Q9HAU4 748 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 DECR2Q9NUI1 292 aa12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 POLR3KQ9Y2Y1 108 aaPredicted RBP12.12□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NOTCH1P46531 2555 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 C5orf49A4QMS7 147 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SHOX2O60902 331 aaPredicted RBP12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SCG5P05408 212 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 UMPSP11172 480 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CCNOP22674 350 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ERVK-25P63136 954 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 HSF2Q03933 536 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 FHL1Q13642 323 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ENDOGQ14249 297 aaKnown RBP12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF718Q3SXZ3 478 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 Q6ZR03 302 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 DOK3Q7L591 496 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PATL1Q86TB9 770 aaKnown RBP12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CALHM3Q86XJ0 350 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 BPIFB2Q8N4F0 458 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SIGLECL1Q8N7X8 197 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 LRRC75AQ8NAA5 344 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 OR10A6Q8NH74 314 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 TAF15Q92804 592 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SIGLEC11Q96RL6 698 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 LRMDAQ9H2I8 198 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF696Q9H7X3 374 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 MSL2Q9HCI7 577 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 INIPQ9NRY2 104 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF69Q9UC07 566 aa12.11□□□□□ -0.47
CHMP4BP1-201ENST00000556017 A0A1W2PRG6 482 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 F5H0A9 414 aaPredicted RBP12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 FXYD1O00168 92 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 FBP2O00757 339 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 TPD52L2O43399 206 aaKnown RBP12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 HIST1H2ABP04908 130 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 DRD4P21917 467 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PPP1CBP62140 327 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PAX2Q02962 417 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PSG7Q13046 419 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CDK5R2Q13319 367 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PIN1Q13526 163 aaPredicted RBP12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 MOGQ16653 247 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 VMACQ2NL98 169 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 HIST3H2AQ7L7L0 130 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 STON2Q8WXE9 905 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 HIST1H2ACQ93077 130 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 TIMD4Q96H15 378 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 DUX5Q96PT3 197 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 OR2H1Q9GZK4 316 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 TXNIPQ9H3M7 391 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 RIMS3Q9UJD0 308 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PURGQ9UJV8 347 aaKnown RBP12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 HIF3AQ9Y2N7 669 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NDUFAF1Q9Y375 327 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NPTNQ9Y639 398 aa12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SOX21Q9Y651 276 aaPredicted RBP12.1□□□□□ -0.47
CHMP4BP1-201ENST00000556017 DNAJC9-AS1A6NH13 148 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 MCIDASD6RGH6 385 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PIP5K1CO60331 668 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF12P17014 697 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PRTN3P24158 256 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 LAP3P28838 519 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 RBM34P42696 430 aaKnown RBP12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 DAP3P51398 398 aaKnown RBP12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SGCAQ16586 387 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF774Q6NX45 483 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF283Q8N7M2 679 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ABHD4Q8TB40 342 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms