RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 OR2T27Q8NH04 317 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 HAVCR2Q8TDQ0 301 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 CA5BP1Q8WTZ4 195 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 ASB17Q8WXJ9 295 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 PTP4A1Q93096 173 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 KISS1RQ969F8 398 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-220ENST00000555634 UBE2FQ969M7 185 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 TSSK2Q96PF2 358 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 MND1Q9BWT6 205 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 HCAR1Q9BXC0 346 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 WDR76Q9H967 626 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 POLE4Q9NR33 117 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 PLSCR4Q9NRQ2 329 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 TMEM38BQ9NVV0 291 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 PSORS1C1Q9UIG5 152 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SCOCQ9UIL1 159 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 FBXL3Q9UKT7 428 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 ERGIC3Q9Y282 383 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 GCN1Q92616 2671 aaKnown RBP9.87□□□□□ -0.83
SHMT2-220ENST00000555634 A0A087WXM4 84 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 A0A0G2JNJ9 132 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 CCDC182A6NF36 153 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 UBL3O95164 117 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 SBK2P0C263 348 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 B4GALT1P15291 398 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 ASCL1P50553 236 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 LSM6P62312 80 aaKnown RBP9.87□□□□□ -0.83
SHMT2-220ENST00000555634 MVKQ03426 396 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 ST3GAL4Q11206 333 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 FOXF2Q12947 444 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 TAF13Q15543 124 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 C1QTNF12Q5T7M4 302 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 UGT2A3Q6UWM9 527 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 NHLRC1Q6VVB1 395 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 SEM1Q6ZVN7 128 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 SLC16A14Q7RTX9 510 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 BCDIN3DQ7Z5W3 292 aaKnown RBP9.87□□□□□ -0.83
SHMT2-220ENST00000555634 LUZP2Q86TE4 346 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 SLC22A24Q8N4F4 322 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 RPRMLQ8N4K4 120 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 SNX33Q8WV41 574 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 FCGR1BQ92637 280 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 DMRTA2Q96SC8 542 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 HDHD5Q9BXW7 423 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 SIAEQ9HAT2 523 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 ADGRL4Q9HBW9 690 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 AMBNQ9NP70 447 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 ELOVL5Q9NYP7 299 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 UBAP1Q9NZ09 502 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 Q9UFV3 132 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 PRSS50Q9UI38 385 aa9.87□□□□□ -0.83
SHMT2-220ENST00000555634 DIMT1Q9UNQ2 313 aaKnown RBP9.87□□□□□ -0.83
SHMT2-220ENST00000555634 ESPL1Q14674 2120 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 TVP23AA6NH52 213 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 DCTN6O00399 190 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF593O00488 134 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 SELENOFO60613 162 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 TOXO94900 526 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 WNT11O96014 354 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 KRT8P05787 483 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 CDK1P06493 297 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 LYNP07948 512 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 RPSAP08865 295 aaKnown RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 CST2P09228 141 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 TACSTD2P09758 323 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 GAAP10253 952 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 GNLYP22749 145 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 ARR3P36575 388 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 SLC15A1P46059 708 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 SLC35A2P78381 396 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 PLP2Q04941 152 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 MRPL28Q13084 256 aaKnown RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 EIF2B1Q14232 305 aaKnown RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 FREM1Q5H8C1 2179 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 C9orf135Q5VTT2 229 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 LRFN4Q6PJG9 635 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF773Q6PK81 442 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 PLEKHG7Q6ZR37 379 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 FOXL2NBQ6ZUU3 175 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 PRSS48Q7RTY5 328 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 BTLAQ7Z6A9 289 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 ALDH16A1Q8IZ83 802 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF843Q8N446 348 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 LRRC18Q8N456 261 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 KLHL36Q8N4N3 616 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 NAXEQ8NCW5 288 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 GJC3Q8NFK1 279 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 STEAP2Q8NFT2 490 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 TSPAN14Q8NG11 270 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 OR52I1Q8NGK6 324 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 NMD3Q96D46 503 aaKnown RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 STARD4Q96DR4 205 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 LGALS12Q96DT0 336 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 FOXN4Q96NZ1 517 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 DDOQ99489 341 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 MROQ9BYG7 248 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 OPN3Q9H1Y3 402 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 C1orf198Q9H425 327 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF696Q9H7X3 374 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms