RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 C9orf40Q8IXQ3 194 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 ABCA7Q8IZY2 2146 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 CDRT4Q8N9R6 151 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 BEST4Q8NFU0 473 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 ITFG1Q8TB96 612 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 TMEM239Q8WW34 195 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 NDRG1Q92597 394 aaKnown RBP4.05□□□□□ -1.76
VRK1-203ENST00000555067 SMARCD2Q92925 531 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 CENPNQ96H22 339 aaPredicted RBP4.05□□□□□ -1.76
VRK1-203ENST00000555067 LGMNQ99538 433 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 CNPY3Q9BT09 278 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 NAT9Q9BTE0 207 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 RNF126Q9BV68 326 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 VCX3AQ9NNX9 186 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 AMBNQ9NP70 447 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 TIGARQ9NQ88 270 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 NDE1Q9NXR1 346 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 NKIRAS1Q9NYS0 192 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 ING4Q9UNL4 249 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 PUS1Q9Y606 427 aaKnown RBP eCLIP4.05□□□□□ -1.76
VRK1-203ENST00000555067 UNC13AQ9UPW8 1703 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 MROH7Q68CQ1 1323 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 GLYATL1P3A0A0U1RQE8 302 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 A0A1W2PPR1 153 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 PSMB11A5LHX3 300 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 H3BN98 237 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 MPDU1O75352 247 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 TDP2O95551 362 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 FADS2O95864 444 aaKnown RBP4.04□□□□□ -1.76
VRK1-203ENST00000555067 TBPP20226 339 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 SHMT2P34897 504 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 HAAOP46952 286 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 STXBP1P61764 594 aaKnown RBP4.04□□□□□ -1.76
VRK1-203ENST00000555067 CALCOCO2Q13137 446 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 SLC10A1Q14973 349 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 ARL6IP1Q15041 203 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 PSMD5Q16401 504 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 MICAQ29983 383 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 NDUFAF6Q330K2 333 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 MREGQ8N565 214 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 ZNF557Q8N988 423 aaPredicted RBP4.04□□□□□ -1.76
VRK1-203ENST00000555067 OR4Q3Q8NH05 313 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 ACER1Q8TDN7 264 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 PGLYRP4Q96LB8 373 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 NOL4LQ96MY1 436 aaPredicted RBP4.04□□□□□ -1.76
VRK1-203ENST00000555067 SERPINB11Q96P15 392 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 SERPINB12Q96P63 405 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 FOXC2Q99958 501 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 SRXN1Q9BYN0 137 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 TMEM38AQ9H6F2 299 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 ARMC7Q9H6L4 198 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 CLN6Q9NWW5 311 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 MUTYHQ9UIF7 546 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 PSMD13Q9UNM6 376 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 CBY1Q9Y3M2 126 aa4.04□□□□□ -1.76
VRK1-203ENST00000555067 LRPPRCP42704 1394 aaKnown RBP4.03□□□□□ -1.76
VRK1-203ENST00000555067 A0A0G2JRQ6 117 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 FAM220BPB1ANY3 271 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 MKRN2OSH3BPM6 223 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 K7EN84 100 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 PRMT5O14744 637 aaPredicted RBP4.03□□□□□ -1.76
VRK1-203ENST00000555067 IGHV3-13P01766 116 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 TACSTD2P09758 323 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 SYT1P21579 422 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 TEAD1P28347 426 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 GCKP35557 465 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 MAGEA6P43360 314 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 CLDN6P56747 220 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 UBE2KP61086 200 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 SP4Q02446 784 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 PDIA2Q13087 525 aaKnown RBP4.03□□□□□ -1.76
VRK1-203ENST00000555067 ATP6V1FQ16864 119 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 C5orf64Q2M2E5 130 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 C5orf47Q569G3 176 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 CDKL4Q5MAI5 379 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 TIGD3Q6B0B8 471 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 Q6ZN92 141 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 ZNF546Q86UE3 836 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 BOD1L2Q8IYS8 172 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 MDS2Q8NDY4 140 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 OR2A12Q8NGT7 310 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 OR2L8Q8NGY9 312 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 OR8D1Q8WZ84 308 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 DYNLL2Q96FJ2 89 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 C7orf50Q9BRJ6 194 aaKnown RBP4.03□□□□□ -1.76
VRK1-203ENST00000555067 UQCC2Q9BRT2 126 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 BEX2Q9BXY8 128 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 UBE2ZQ9H832 354 aaPredicted RBP4.03□□□□□ -1.76
VRK1-203ENST00000555067 CTPS2Q9NRF8 586 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 MCUBQ9NWR8 336 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 RBAKQ9NYW8 714 aaPredicted RBP4.03□□□□□ -1.76
VRK1-203ENST00000555067 SENP1Q9P0U3 644 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 ZNF256Q9Y2P7 627 aaPredicted RBP4.03□□□□□ -1.76
VRK1-203ENST00000555067 GOLT1BQ9Y3E0 138 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 HYOU1Q9Y4L1 999 aa4.03□□□□□ -1.76
VRK1-203ENST00000555067 ADCY9O60503 1353 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 IGLV4-3A0A075B6K6 122 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 KIR2DL5BA0A0G2JN68 375 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 KIR2DL5BA0A0G2JPC4 375 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms