RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 IFNGR1P15260 489 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 ATF1P18846 271 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 SRMP19623 302 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 GIFP27352 417 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 GDNFP39905 211 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 ART1P52961 327 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 BLVRAP53004 296 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 OR12D2P58182 307 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 MGAT2Q10469 447 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 STX4Q12846 297 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 RUNX2Q13950 521 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 MPPED2Q15777 294 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 TCTE1Q5JU00 501 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 B3GNTL1Q67FW5 361 aaPredicted RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 LCN10Q6JVE6 187 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 RPTNQ6XPR3 784 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 DNM1P46Q6ZS02 220 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 SLC38A9Q8NBW4 561 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 CLEC1AQ8NC01 280 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 OR11H7Q8NGC8 314 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 GIMAP1Q8WWP7 306 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 CLIP3Q96DZ5 547 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 SLC7A5P2Q9GIP4 190 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 PPIL3Q9H2H8 161 aaKnown RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 MCCC2Q9HCC0 563 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 MEPEQ9NQ76 525 aaPredicted RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 EXOSC3Q9NQT5 275 aaKnown RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 DLL4Q9NR61 685 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 C20orf141Q9NUB4 165 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 DNAJB12Q9NXW2 375 aaKnown RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 SLCO1C1Q9NYB5 712 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 TAS2R5Q9NYW4 299 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 SLC23A1Q9UHI7 598 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 ZNF107Q9UII5 783 aaPredicted RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 CSAG2Q9Y5P2 127 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 SESN1Q9Y6P5 492 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 GTF3C1Q12789 2109 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 TRAV6A0A075B6T7 132 aa10□□□□□ -0.81
SRP54-205ENST00000554803 A0A087WUJ7 227 aa10□□□□□ -0.81
SRP54-205ENST00000554803 ANKRD20A5PA0PJZ0 165 aa10□□□□□ -0.81
SRP54-205ENST00000554803 UBE2QL1A1L167 161 aa10□□□□□ -0.81
SRP54-205ENST00000554803 SYNDIG1LA6NDD5 238 aa10□□□□□ -0.81
SRP54-205ENST00000554803 NPIPB9F8W1W9 429 aa10□□□□□ -0.81
SRP54-205ENST00000554803 ZNF593O00488 134 aaPredicted RBP10□□□□□ -0.81
SRP54-205ENST00000554803 AKR7A2O43488 359 aa10□□□□□ -0.81
SRP54-205ENST00000554803 LANCL1O43813 399 aa10□□□□□ -0.81
SRP54-205ENST00000554803 CREBL2O60519 120 aaPredicted RBP10□□□□□ -0.81
SRP54-205ENST00000554803 ICMTO60725 284 aa10□□□□□ -0.81
SRP54-205ENST00000554803 PRAMEF2O60811 474 aa10□□□□□ -0.81
SRP54-205ENST00000554803 TXNDC12O95881 172 aa10□□□□□ -0.81
SRP54-205ENST00000554803 TFPIP10646 304 aa10□□□□□ -0.81
SRP54-205ENST00000554803 EDNRAP25101 427 aa10□□□□□ -0.81
SRP54-205ENST00000554803 GABRA3P34903 492 aa10□□□□□ -0.81
SRP54-205ENST00000554803 ACAA2P42765 397 aaKnown RBP10□□□□□ -0.81
SRP54-205ENST00000554803 SOX8P57073 446 aa10□□□□□ -0.81
SRP54-205ENST00000554803 RPS4XP62701 263 aaKnown RBP10□□□□□ -0.81
SRP54-205ENST00000554803 IGLV3-21P80748 117 aaPredicted RBP10□□□□□ -0.81
SRP54-205ENST00000554803 TLE4Q04727 773 aa10□□□□□ -0.81
SRP54-205ENST00000554803 EGR3Q06889 387 aa10□□□□□ -0.81
SRP54-205ENST00000554803 GRM7Q14831 915 aa10□□□□□ -0.81
SRP54-205ENST00000554803 CPEB4Q17RY0 729 aaKnown RBP eCLIP10□□□□□ -0.81
SRP54-205ENST00000554803 FAM209AQ5JX71 171 aa10□□□□□ -0.81
SRP54-205ENST00000554803 MTFR2Q6P444 385 aa10□□□□□ -0.81
SRP54-205ENST00000554803 FAM198BQ6UWH4 519 aa10□□□□□ -0.81
SRP54-205ENST00000554803 SLC16A9Q7RTY1 509 aa10□□□□□ -0.81
SRP54-205ENST00000554803 MEX3DQ86XN8 651 aaKnown RBP10□□□□□ -0.81
SRP54-205ENST00000554803 ADGRG3Q86Y34 549 aa10□□□□□ -0.81
SRP54-205ENST00000554803 ZNF595Q8IYB9 648 aa10□□□□□ -0.81
SRP54-205ENST00000554803 C17orf47Q8NEP4 570 aa10□□□□□ -0.81
SRP54-205ENST00000554803 OR5J2Q8NH18 312 aa10□□□□□ -0.81
SRP54-205ENST00000554803 ZNF417Q8TAU3 575 aa10□□□□□ -0.81
SRP54-205ENST00000554803 ZDHHC19Q8WVZ1 309 aaPredicted RBP10□□□□□ -0.81
SRP54-205ENST00000554803 HAVCR1Q96D42 359 aa10□□□□□ -0.81
SRP54-205ENST00000554803 FER1L6-AS2Q96M78 137 aa10□□□□□ -0.81
SRP54-205ENST00000554803 CITED4Q96RK1 184 aa10□□□□□ -0.81
SRP54-205ENST00000554803 REPIN1Q9BWE0 567 aaKnown RBP10□□□□□ -0.81
SRP54-205ENST00000554803 HCAR1Q9BXC0 346 aa10□□□□□ -0.81
SRP54-205ENST00000554803 GSX2Q9BZM3 304 aa10□□□□□ -0.81
SRP54-205ENST00000554803 MED20Q9H944 212 aa10□□□□□ -0.81
SRP54-205ENST00000554803 Q9N2J8 555 aa10□□□□□ -0.81
SRP54-205ENST00000554803 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
SRP54-205ENST00000554803 CUTCQ9NTM9 273 aa10□□□□□ -0.81
SRP54-205ENST00000554803 DHCR7Q9UBM7 475 aaKnown RBP10□□□□□ -0.81
SRP54-205ENST00000554803 V9GY05 133 aa10□□□□□ -0.81
SRP54-205ENST00000554803 ATRQ13535 2644 aa10□□□□□ -0.81
SRP54-205ENST00000554803 FN1P02751 2386 aaKnown RBP9.99□□□□□ -0.81
SRP54-205ENST00000554803 TMEM200CA6NKL6 621 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 TMEM212A6NML5 194 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 C9J4A7 227 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 E9PI62 339 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 C19orf84I3L1E1 186 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 OR10H2O60403 315 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 OR7A10O76100 309 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 OR2A4O95047 310 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 MELTFP08582 738 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 CSF1P09603 554 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 RRASP10301 218 aa9.99□□□□□ -0.81
SRP54-205ENST00000554803 CALCRP30988 508 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms