RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 LRGUKQ96M69 825 aa9.2□□□□□ -0.94
SHMT2-213ENST00000554600 FOXN4Q96NZ1 517 aa9.2□□□□□ -0.94
SHMT2-213ENST00000554600 MRPL37Q9BZE1 423 aaKnown RBP9.2□□□□□ -0.94
SHMT2-213ENST00000554600 MUC13Q9H3R2 512 aa9.2□□□□□ -0.94
SHMT2-213ENST00000554600 IL1RAPQ9NPH3 570 aa9.2□□□□□ -0.94
SHMT2-213ENST00000554600 SLC7A8Q9UHI5 535 aa9.2□□□□□ -0.94
SHMT2-213ENST00000554600 DUSP13Q9UII6 198 aa9.2□□□□□ -0.94
SHMT2-213ENST00000554600 FBXO9Q9UK97 447 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-213ENST00000554600 IER3IP1Q9Y5U9 82 aa9.2□□□□□ -0.94
SHMT2-213ENST00000554600 A0A1W2PPW3 197 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 SLC22A23A1A5C7 686 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 PRSS37A4D1T9 235 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 M0R233 179 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 MGRN1O60291 552 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 PTP4A3O75365 173 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 PPP1R3DO95685 299 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 F12P00748 615 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 MMP7P09237 267 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 CSF3P09919 207 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 T-ENOLP0DO92 83 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 ZNF26P17031 533 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 MSR1P21757 451 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 PCSK6P29122 969 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 SDHAP31040 664 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 SLC6A6P31641 620 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 GDI2P50395 445 aaKnown RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 RPS6KA3P51812 740 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 SELENOVP59797 346 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 PCBD1P61457 104 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 PPP2R2BQ00005 443 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 TRIM25Q14258 630 aaKnown RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 IQCCQ4KMZ1 466 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 FAM27BQ5VT28 67 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 RGS7BPQ6MZT1 257 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 SMARCD3Q6STE5 483 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 THSD4Q6ZMP0 1018 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 TRPM8Q7Z2W7 1104 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 ZER1Q7Z7L7 766 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 ALDH16A1Q8IZ83 802 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 ZCCHC24Q8N2G6 241 aaKnown RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 PAQR4Q8N4S7 273 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 MRPL24Q96A35 216 aaKnown RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 NABP1Q96AH0 204 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 CLPTM1LQ96KA5 538 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 ERMAPQ96PL5 475 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 DOK1Q99704 481 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 THTPAQ9BU02 230 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 IFT27Q9BW83 186 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 SYT4Q9H2B2 425 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 TPK1Q9H3S4 243 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 EMC7Q9NPA0 242 aa9.19□□□□□ -0.94
SHMT2-213ENST00000554600 PRPF19Q9UMS4 504 aaKnown RBP9.19□□□□□ -0.94
SHMT2-213ENST00000554600 TMEM129A0AVI4 362 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 C5orf49A4QMS7 147 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 C12orf71A8MTZ7 269 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 TNFRSF11BO00300 401 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 SYNGR3O43761 229 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 AHCYL1O43865 530 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 SLC16A7O60669 478 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 KHDRBS3O75525 346 aaKnown RBP9.18□□□□□ -0.94
SHMT2-213ENST00000554600 DYSFO75923 2080 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 KRT36O76013 467 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 UBOX5O94941 541 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 CST2P09228 141 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 SLC25A16P16260 332 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 CTLA4P16410 223 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 STOMP27105 288 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 NOS3P29474 1203 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 RAD52P43351 418 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 ALDH3B1P43353 468 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 PSG4Q00888 419 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 MS4A2Q01362 244 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 PPP1R8Q12972 351 aaKnown RBP9.18□□□□□ -0.94
SHMT2-213ENST00000554600 GGTLC2Q14390 218 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 MAD2L1BPQ15013 274 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-213ENST00000554600 NKPD1Q17RQ9 610 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 MSMPQ1L6U9 139 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 FAM98BQ52LJ0 330 aaKnown RBP9.18□□□□□ -0.94
SHMT2-213ENST00000554600 LCN8Q6JVE9 175 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 DPY19L2P2Q6ZN68 376 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 DNM1P46Q6ZS02 220 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 FAM122BQ7Z309 247 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-213ENST00000554600 ADCK1Q86TW2 530 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 LRP11Q86VZ4 500 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 JAZF1Q86VZ6 243 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 OR10H5Q8NGA6 315 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 GNPDA2Q8TDQ7 276 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 C10orf105Q8TEF2 133 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 C11orf40Q8WZ69 217 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 SAMD8Q96LT4 415 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 GPA33Q99795 319 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 PIMREGQ9BSJ6 248 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 FUZQ9BT04 418 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 ZNF416Q9BWM5 594 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 TRIM15Q9C019 465 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 OR2H1Q9GZK4 316 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 OR52D1Q9H346 318 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 NRIP3Q9NQ35 241 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 POLE4Q9NR33 117 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms