RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 RNF113BQ8IZP6 322 aaKnown RBP10.11□□□□□ -0.79
SRP54-203ENST00000553544 LRRC75AQ8NAA5 344 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 FAM162AQ96A26 154 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 MRPL24Q96A35 216 aaKnown RBP10.11□□□□□ -0.79
SRP54-203ENST00000553544 BPIFA2Q96DR5 249 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 HSH2DQ96JZ2 352 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 DDX28Q9NUL7 540 aaKnown RBP10.11□□□□□ -0.79
SRP54-203ENST00000553544 ADA2Q9NZK5 511 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 RHCGQ9UBD6 479 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 MAGEL2Q9UJ55 1249 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 FBXL3Q9UKT7 428 aa10.11□□□□□ -0.79
SRP54-203ENST00000553544 SAMD4AQ9UPU9 718 aaKnown RBP10.11□□□□□ -0.79
SRP54-203ENST00000553544 LOC105371242A0A075B767 164 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 A0A087WUU8 490 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 A0A0G2JK05 382 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 M0R233 179 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 PPIHO43447 177 aaKnown RBP10.1□□□□□ -0.79
SRP54-203ENST00000553544 MGRN1O60291 552 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 ENTPD5O75356 428 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 ZNF682O95780 498 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 IGHMP01871 453 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 HPXP02790 462 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 IFI30P13284 250 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 NCK1P16333 377 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 TCN1P20061 433 aaPredicted RBP10.1□□□□□ -0.79
SRP54-203ENST00000553544 MAKP20794 623 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 FPR2P25090 351 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 GLRXP35754 106 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 PTDSS1P48651 473 aaKnown RBP10.1□□□□□ -0.79
SRP54-203ENST00000553544 DAP3P51398 398 aaKnown RBP10.1□□□□□ -0.79
SRP54-203ENST00000553544 CLRN1P58418 232 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 LMO4P61968 165 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 MRPS11P82912 194 aaKnown RBP10.1□□□□□ -0.79
SRP54-203ENST00000553544 RAB39AQ14964 217 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 TAF11Q15544 211 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 FXNQ16595 210 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 MSMPQ1L6U9 139 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 ANKDD1AQ495B1 522 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 KRT80Q6KB66 452 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 TREML4Q6UXN2 200 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 C1orf229Q6ZS94 237 aaPredicted RBP10.1□□□□□ -0.79
SRP54-203ENST00000553544 HDDC2Q7Z4H3 204 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 NRMQ8IXM6 262 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 BPIFB2Q8N4F0 458 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 NOXO1Q8NFA2 376 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 NANPQ8TBE9 248 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 ACOT11Q8WXI4 607 aaPredicted RBP10.1□□□□□ -0.79
SRP54-203ENST00000553544 HDAC2Q92769 488 aaKnown RBP10.1□□□□□ -0.79
SRP54-203ENST00000553544 NSL1Q96IY1 281 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 SH3GL3Q99963 347 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 FNDC11Q9BVV2 318 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 TXNIPQ9H3M7 391 aa10.1□□□□□ -0.79
SRP54-203ENST00000553544 STX18Q9P2W9 335 aaKnown RBP10.1□□□□□ -0.79
SRP54-203ENST00000553544 IGKV1D-43A0A0B4J1Z2 117 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 MCIDASD6RGH6 385 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 WNT9BO14905 357 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 FARS2O95363 451 aaKnown RBP10.09□□□□□ -0.79
SRP54-203ENST00000553544 RAB36O95755 333 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 AVPP01185 164 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 MMP7P09237 267 aaPredicted RBP10.09□□□□□ -0.79
SRP54-203ENST00000553544 HKR1P10072 659 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 HSD17B1P14061 328 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 SLC9A3P48764 834 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 ALG10Q5BKT4 473 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 GLYATQ6IB77 296 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 TMPRSS11FQ6ZWK6 438 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 MBOAT2Q6ZWT7 520 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 FKBP9P1Q75LS8 142 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 DPPA2Q7Z7J5 298 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 CYP4Z1Q86W10 505 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 ZDHHC22Q8N966 263 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 SYT14Q8NB59 555 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 FAM156AQ8NDB6 213 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 RBM15BQ8NDT2 890 aaKnown RBP10.09□□□□□ -0.79
SRP54-203ENST00000553544 OR4K5Q8NGD3 323 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 C7orf34Q96L11 122 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 ZNF416Q9BWM5 594 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 MRPL37Q9BZE1 423 aaKnown RBP10.09□□□□□ -0.79
SRP54-203ENST00000553544 MUC13Q9H3R2 512 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 ANKRD19PQ9H560 264 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 SMURF2Q9HAU4 748 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 NTN4Q9HB63 628 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 G6PC2Q9NQR9 355 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 ZNF275Q9NSD4 429 aaPredicted RBP10.09□□□□□ -0.79
SRP54-203ENST00000553544 DCAF13Q9NV06 445 aaKnown RBP10.09□□□□□ -0.79
SRP54-203ENST00000553544 EGFL7Q9UHF1 273 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 ZNF346Q9UL40 294 aaKnown RBP10.09□□□□□ -0.79
SRP54-203ENST00000553544 UGT2A1Q9Y4X1 527 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 ENPP4Q9Y6X5 453 aa10.09□□□□□ -0.79
SRP54-203ENST00000553544 A0A0G2JMP0 313 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 A0A0X1KG70 313 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 A0A1W2PRQ8 180 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 CDC42EP2O14613 210 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 SLC2A10O95528 541 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 ZNF84P51523 738 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 CTXN1P60606 82 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 RPL27P61353 136 aaKnown RBP10.08□□□□□ -0.8
SRP54-203ENST00000553544 MRPS34P82930 218 aaKnown RBP10.08□□□□□ -0.8
SRP54-203ENST00000553544 DGCR6Q14129 220 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 SLC36A2Q495M3 483 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms