RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 IMPAD1Q9NX62 359 aa3.25□□□□□ -1.89
ATXN3-217ENST00000553287 DNAJB9Q9UBS3 223 aa3.25□□□□□ -1.89
ATXN3-217ENST00000553287 PCYOX1Q9UHG3 505 aa3.25□□□□□ -1.89
ATXN3-217ENST00000553287 ZNF223Q9UK11 482 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-217ENST00000553287 FBXW2Q9UKT8 454 aa3.25□□□□□ -1.89
ATXN3-217ENST00000553287 KLF13Q9Y2Y9 288 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-217ENST00000553287 TRBV11-1A0A0K0K1C0 115 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 CTAGE15A4D2H0 777 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 WWP2O00308 870 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 LIN7AO14910 233 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-217ENST00000553287 OR2J2O76002 312 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 LYPD3O95274 346 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 C1orf105O95561 183 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 CPA3P15088 417 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 FERP16591 822 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 COILP38432 576 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-217ENST00000553287 MFAP2P55001 183 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 RPA4Q13156 261 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 POU6F1Q14863 301 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 HEPACAMQ14CZ8 416 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 RPS6KA1Q15418 735 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 MICAQ29983 383 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 SLC25A35Q3KQZ1 300 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 CHRFAM7AQ494W8 412 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 RIPPLY2Q5TAB7 128 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 MFSD7Q6UXD7 560 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 ABHD13Q7L211 337 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 ZNF550Q7Z398 422 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 CTAGE6Q86UF2 777 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 PAQR7Q86WK9 346 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 TMEM156Q8N614 296 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 ZNF321PQ8N8H1 164 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 MLKLQ8NB16 471 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 SLC22A8Q8TCC7 542 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 DOK4Q8TEW6 326 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 SKA2Q8WVK7 121 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-217ENST00000553287 WFIKKN1Q96NZ8 548 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 OR2A5Q96R48 311 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 ST6GALNAC5Q9BVH7 336 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 Q9HAA7 133 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 SLC25A19Q9HC21 320 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 MRPL47Q9HD33 250 aaKnown RBP3.24□□□□□ -1.89
ATXN3-217ENST00000553287 SH2D2AQ9NP31 389 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 PLSCR3Q9NRY6 295 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 HOMER3Q9NSC5 361 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 KLHL28Q9NXS3 571 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 TECRQ9NZ01 308 aaKnown RBP3.24□□□□□ -1.89
ATXN3-217ENST00000553287 GALPQ9UBC7 116 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 SLC2A6Q9UGQ3 507 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 TAC3Q9UHF0 121 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 MOKQ9UQ07 419 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 ARID1AO14497 2285 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 RAI1Q7Z5J4 1906 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-217ENST00000553287 DSCAMO60469 2012 aa3.24□□□□□ -1.89
ATXN3-217ENST00000553287 FREM3P0C091 2139 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 VWFP04275 2813 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 A0A087X0T9 212 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 TRGV5A0A0B4J1U4 118 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 DEFB108AA8MXU0 73 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 LCMT2O60294 686 aaKnown RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 MYO1DO94832 1006 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 GLSO94925 669 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 SNRPCP09234 159 aaKnown RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 FAM228BP0C875 321 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 P0C879 139 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 CCL3P10147 92 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 PTNP21246 168 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 DPP4P27487 766 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 CMPK1P30085 196 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ADRA1AP35348 466 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ACVR1BP36896 505 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 TNNT3P45378 269 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 SLCO1A2P46721 670 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 SLC7A2P52569 658 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ATP5J2P56134 94 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 KLHL30Q0D2K2 578 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 PDK1Q15118 436 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 PDK2Q15119 407 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 HADHQ16836 314 aaKnown RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 CLEC12BQ2HXU8 276 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ACSF3Q4G176 576 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ANKRD20A4Q4UJ75 823 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ANKRD20A2Q5SQ80 823 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ANKRD20A1Q5TYW2 823 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 PRAMEF20Q5VT98 475 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ANKRD20A3Q5VUR7 823 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 APOOLQ6UXV4 268 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 APTXQ7Z2E3 356 aaKnown RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 VN1R4Q7Z5H5 301 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 SLC26A11Q86WA9 606 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 GCNT2Q8N0V5 402 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 LRRC75A-AS1Q8N1F1 130 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 NFAM1Q8NET5 270 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 TFB1MQ8WVM0 346 aaKnown RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 NCLNQ969V3 563 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 RERGQ96A58 199 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 JSRP1Q96MG2 331 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 PRAP1Q96NZ9 151 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 SPAG8Q99932 426 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 REG4Q9BYZ8 158 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms